Publications

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2013
Pilát Z, Ježek J, Šerý M, Trtílek M, Nedbal L, Zemánek P. Optical trapping of microalgae at 735–1064 nm: Photodamage assessment. J. Photochem. Photobiol. B, 121, 27 - 31 (2013).
Aas M, Jonáš A, Kiraz A, Brzobohatý O, Ježek J, Pilát Z, Zemánek P. Spectral tuning of lasing emission from optofluidic droplet microlasers using optical stretching. Opt. Express, 21, 21380-21394 (2013).
2012
Pořízka P, Procházka D, Pilát Z, Krajčarová L, Kaiser J, Malina R, Novotný J, Zemánek P, Ježek J, Šerý M, Bernatová S, Krzyžánek V, Dobranská K, Novotný K, Trtílek M, Samek O. Application of laser-induced breakdown spectroscopy to the analysis of algal biomass for industrial biotechnology. Spectrochim. Acta B, 74-75, 169-176 (2012).
Trojek J, Chvátal L, Zemánek P. Optical alignment and confinement of an ellipsoidal nanorod in optical tweezers: a theoretical study. J. Opt. Soc. Am. A, 29, 1224–1236 (2012).
Šiler M, Jákl P, Brzobohatý O, Zemánek P. Optical forces induced behavior of a particle in a non-diffracting vortex beam. Opt. Express, 20, 24304-24319 (2012).
Pilát Z, Bernatová S, Ježek J, Šerý M, Samek O, Zemánek P, Nedbal L, Trtílek M. Raman microspectroscopy of algal lipid bodies: beta-carotene quantification. J. Appl. Phycol., 24, 541-546 (2012).
Šiler M, Čižmár T, Zemánek P. Speed enhancement of multi-particle chain in a traveling standing wave. Appl. Phys. Lett., 100, 051103 (2012).
2011
Samek O, Zemánek P, Jonáš A, Telle HH. Characterization of oil-producing microalgae using Raman spectroscopy. Laser Phys. Lett., 8, 701–709 (2011).
Brzobohatý O, Karásek V, Čižmár T, Zemánek P. Dynamic size tuning of multidimensional optically bound matter. Appl. Phys. Lett., 99, 101105 (2011).
Čižmár T, Brzobohatý O, Dholakia K, Zemánek P. The holographic optical micro-manipulation system based on counter-propagating beams. Laser Phys. Lett., 8, 50–56 (2011).
Šiler M, Zemánek P. Parametric study of optical forces acting upon nanoparticles in a single, or a standing, evanescent wave. J. Opt., 13, 044016:1–9 (2011).
Brzobohatý O, Karásek V, Šiler M, Trojek J, Zemánek P. Static and dynamic behavior of two optically bound microparticles in a standing wave. Opt. Express, 19, 19613–19626 (2011).
2010
Jonáš A, De Luca AC, Pesce G, Rusciano G, Sasso A, Caserta S, Guido S, Marrucci G. Diffusive Mixing of Polymers Investigated by Raman Microspectroscopy and Microrheology. Langmuir, 26, 14223-14230 (2010).
Brzobohatý O, Čižmár T, Karásek V, Šiler M, Dholakia K, Zemánek P. Experimental and theoretical determination of optical binding forces. Opt. Express, 18, 25389–25402 (2010).
Dholakia K, Zemánek P. Gripped by light: Optical binding. Rev. Mod. Phys., 82, 1767–1791 (2010).
Šiler M, Zemánek P. Particle jumps between optical traps in a one-dimensional optical lattice. New. J. Phys., 12, 083001:1–20 (2010).
Samek O, Al-Marashi JFM, Telle HH. The potential of Raman spectroscopy for the identification of biofilm formation by Staphylococcus epidermidis. Laser Phys. Lett., 7, 378–383 (2010).
Samek O, Jonáš A, Pilát Z, Zemánek P, Nedbal L, Tříska J, Kotas P, Trtílek M. Raman Microspectroscopy of Individual Algal Cells: Sensing Unsaturation of Storage Lipids in vivo. Sensors, 10, 8635–8651 (2010).
2009
Bartsch TF, Fisinger S, Kochanczyk MD, Huang R, Jonáš A, Florin E-L. Detecting Sequential Bond Formation Using Three-Dimensional Thermal Fluctuation Analysis. Chem. Phys. Chem., 10, 1541-1547 (2009).
Wu P, Huang R, Tischer C, Jonáš A, Florin E-L. Direct Measurement of the Nonconservative Force Field Generated by Optical Tweezers. Phys. Rev. Lett., 103, 108101 (2009).
Trojek J, Karásek V, Zemánek P. Extreme axial optical force in a standing wave achieved by optimized object shape. Opt. Express, 17, 10472–10488 (2009).
Karásek V, Brzobohatý O, Zemánek P. Longitudinal optical binding of several spherical particles studied by the coupled dipole method. J. Opt. A: Pure Appl. Opt., 11, 034009 (2009).
2008
Brzobohatý O, Čižmár T, Zemánek P. High quality quasi-Bessel beam generated by round-tip axicon. Opt. Express, 16, 12688–12700 (2008).
Jonáš A, Zemánek P. Light at work: The use of optical forces for particle manipulation, sorting, and analysis. Electophoresis, 29, 4813–4851 (2008).
Karásek V, Čižmár T, Brzobohatý O, Zemánek P, Garcés-Chávez V, Dholakia K. Long-range one-dimensional longitudinal optical binding. Phys. Rev. Lett., 101, 143601 (2008).
Jákl P, Čižmár T, Šerý M, Zemánek P. Static optical sorting in a laser interference field. Appl. Phys. Lett., 92, 161110:1–3 (2008).
Šiler M, Čižmár T, Jonáš A, Zemánek P. Surface delivery of a single nanoparticle under moving evanescent standing-wave illumination. New. J. Phys., 10, 113010 (2008).
2007
Karásek V, Zemánek P. Analytical description of longitudinal optical binding of two spherical nanoparticles. J. Opt. A: Pure Appl. Opt., 9, S215–S220 (2007).
Jákl P, Šerý M, Ježek J, Liška M, Zemánek P. Axial optical trap stiffness influenced by retro-reflected beam. J. Opt. A: Pure Appl. Opt., 9, S251–S255 (2007).
Dholakia K, MacDonald MP, Zemánek P, Čižmár T. Cellular and colloidal separation using optical forces. Methods in Cell Biology, 82, 467–495 (2007).
Šiler M, Zemánek P. Optical forces acting on a nanoparticle placed into an interference evanescent field. Opt. Commun., 275, 409–420 (2007).
Čižmár T, Zemánek P. Optical tracking of spherical micro-objects in spatially periodic interference fields. Opt. Express, 15, 2262–2272 (2007).
Jákl P, Šerý M, Ježek J, Zemánek P, Ormos P, Valkai S, Kelemen L. Opto-fluidic micromanipulation system based on integrated polymer waveguides. J. Optoel Adv. Mater., 9, 2148-2151 (2007).
Milne G, Dholakia K, McGloin D, Volke-Sepúlveda K, Zemánek P. Transverse particle dynamics in a Bessel beam. Opt. Express, 15, 13972–13987 (2007).
2006
Karásek V, Dholakia K, Zemánek P. Analysis of optical binding in one dimension. Appl. Phys. B, 84, 149–156 (2006).
Ježek J, Čižmár T, Neděla V, Zemánek P. Formation of long and thin polymer fiber using nondiffracting beam. Opt. Express, 14, 8506-8515 (2006).
Šiler M, Čižmár T, Šerý M, Zemánek P. Optical forces generated by evanescent standing waves and their usage for sub-micron particle delivery. Appl. Phys. B, 84, 157–165 (2006).
Čižmár T, Šiler M, Zemánek P. An optical nanotrap array movable over a milimetre range. Appl. Phys. B, 84, 197–203 (2006).
Čižmár T, Šiler M, Šerý M, Zemánek P, Garcés-Chávez V, Dholakia K. Optical sorting and detection of sub-micron objects in a motional standing wave. Phys. Rev. B, 74, 035105:1-6 (2006).
Čižmár T, Kollárová V, Bouchal Z, Zemánek P. Sub-micron particle organization by self-imaging of non-diffracting beams. New. J. Phys., 8, 43 (2006).
2005
Čižmár T, Garcés-Chávez V, Dholakia K, Zemánek P. Optical conveyor belt for delivery of submicron objects. Appl. Phys. Lett., 86, 174101-1–174101-3 (2005).
Casaburi A, Pesce G, Zemánek P, Sasso A. Two-and three-beam interferometric optical tweezers. Opt. Commun., 251, 393–404 (2005).
2004
Zemánek P, Karásek V, Sasso A. Optical forces acting on Rayleigh particle placed into interference field. Opt. Commun., 240, 401-415 (2004).
2003
Jákl P, Šerý M, Ježek J, Jonáš A, Liška M, Zemánek P. Behaviour of an optically trapped probe approaching a dielectric interface. J Mod. Optics, 50, 1615-1625 (2003).
Zemánek P, Jonáš A, Jákl P, Šerý M, Ježek J, Liška M. Theoretical comparison of optical traps created by standing wave and single beam. Opt. Commun., 220, 401-412 (2003).
2002
Zemánek P, Jonáš A, Liška M. Simplified description of optical forces acting on a nanoparticle in the Gaussian standing wave. J. Opt. Soc. Am. A, 19, 1025-1034 (2002).
2001
Jonáš A, Zemánek P, Florin E-L. Single beam trapping in front of reflective surfaces. Opt. Lett., 26, 1466–1468 (2001).
1999
Zemánek P, Jonáš A, Šrámek L, Liška M. Optical trapping of nanoparticles and microparticles using Gaussian standing wave. Opt. Lett., 24, 1448–1450 (1999).
1998
Zemánek P, Foot CJ. Atomic dipole trap formed by a blue detuned strong Gaussian standing wave. Opt. Commun., 146, 119–123 (1998).
Zemánek P, Jonáš A, Šrámek L, Liška M. Optical trapping of Rayleigh particles using a Gaussian standing wave. Opt. Commun., 151, 273–285 (1998).

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