Publications

International journals Local journals Conference proceedings Ph.D. Thesis Posters BibTeX Movies


International journals

2017

K. Rebrosovsa, M. Siler, O. Samek, F. Ruzicka, S. Bernatova, V. Hola, J. Jezek, P. Zemanek, J. Sokolova, P. Petras: "Rapid identification of staphylococci by Raman spectroscopy",
       Scientific Reports 7, 14846, 2017, ABSTRACT   DOWNLOAD

J. Gargiulo, I. L. Violi, S. Cerrota, L. Chvatal, E. Cortes, E. M. Perassi, F. Diaz, P. Zemanek, F. D. Stefani: "Accuracy and mechanistic details of optical printing of single Au and Ag nanoparticles",
       ACSNano ASAP, ABSTRACT

A. Jonas, Z. Pilat, J. Jezek, S. Bernatova, T. Fort, P. Zemanek, M. Aas, A. Kiraz: "Thermal tuning of spectral emission from optically trapped liquid-crystal droplet resonators",
       JOSA B 34, 1855-1864, 2017, ABSTRACT

K. Rebrosovsa, M. Siler, O. Samek, F. Ruzicka, S. Bernatova, J. Jezek, P. Zemanek, V. Hola: "Differentiation between Staphylococcus aureus and Staphylococcus epidermidis strains using Raman spectroscopy",
       Future Microbiology 12, 881-890, 2017, ABSTRACT

S. H. Simpson , P. Zemánek, O. M. Marago, P. H. Jones, and Simon Hanna: "Optical Binding of Nanowires",
       Nano Letters 17, 3485, 2017, ABSTRACT

M.Siler, P. Jakl, O. Brzobohaty, A. Ryabov, R. Filip, P. Zemanek: "Thermally induced micro-motion by inflection in optical potential",
       Scientific Reports 7, 1697, 2017, ABSTRACT   DOWNLOAD

A. V. Arzola, M. Villasante-Barahona, K. Volke-Sepulveda, P. Jakl, P. Zemanek: "Omnidirectional transport in fully reconfigurable two dimensional optical ratchets",
       Phys. Rev. Lett. 118, 138002, 2017, ABSTRACT

V. Karasek, M. Siler, O. Brzobohaty, P. Zemanek: "Dynamics of an optically bound structure made of particles of unequal sizes",
       Opt. Lett. 42, pp. 1436-1439, 2017, ABSTRACT

2016

O. Brzobohaty, R. J. Hernandez, S. Simpson, A. Mazzulla, G. Cipparrone, P. Zemanek: "Chiral particles in the dual-beam optical trap",
       Optics Express 24, 2016, ABSTRACT

O. Samek, S. Obruca, M. Siler, P. Sedlacek, P. Benesova, D. Kucera, I. Marova, J. Jezek, S. Bernatova, P. Zemanek: "Quantitative Raman Spectroscopy Analysis of Polyhydroxyalkanoates Produced by Cupriavidus necator H16",
       Sensors 16, 2016, ABSTRACT

K. Hrubanova, O. Samek, A. Haronikova, S. Bernatova, P. Zemanek, I. Marova, V. Krzyzanek: "Morphological and Production Changes in Stressed Red Yeasts Monitored Using SEM and Raman Spectroscopy",
       Microscopy and Microanalysis 22(S3), 2016, ABSTRACT

A. Ryabov, P. Zemanek, and R. Filip: "Thermally induced passage and current of particles in a highly unstable optical potential",
       Phys. Rev. E 94, 042108, 2016, ABSTRACT

A. Irrera, A. Magazzu, P. Artoni, S. H. Simpson, S. Hanna, P. H. Jones, F. Priolo, P. G. Gucciardi, and O. M. Marago: "Photonic Torque Microscopy of the Nonconservative Force Field for Optically Trapped Silicon Nanowires",
       Nano Lett.16 4181-4188, 2016, ABSTRACT

F. Mravec, S. Obruca, V. Krzyzanek, P. Sedlacek, K. Hrubanova, O. Samek, D. Kucera, P. Benesova, J. Nebesarova: "Accumulation of PHA granules in Cupriavidus necator as seen by confocal fluorescence microscopy",
       FEMS Microbiology Letters 363(10), 2016, ABSTRACT   DOWNLOAD

S. Obruca, P. Sedlacek, V. Krzyzanek, F. Mravec, K. Hrubanova, O. Samek, D. Kucera, P. Benesova, I. Marova: "Accumulation of Poly(3-hydroxybutyrate) Helps Bacterial Cells to Survive Freezing",
       PLoS ONE 11, e0157778, 2016, ABSTRACT   DOWNLOAD

M. Antognozzi, C. R. Bermingham, R. L. Harniman, S. Simpson, J. Senior, R. Hayward, H. Hoerber, M. R. Dennis, A. Y. Bekshaev, K. Y. Bliokh, F. Nori: "Direct measurements of the extraordinary optical momentum and transverse spin-dependent force using a nano-cantilever",
       Nature Physics12, 731-735, 2016, ABSTRACT

R. Filip, P. Zemanek: "Noise-to-signal transition of a Brownian particle in the cubic potential: I. general theory",
       Journal of Optics 18, 065401, 2016, ABSTRACT   DOWNLOAD

P. Zemanek, M.Siler, O. Brzobohaty, P. Jakl, R. Filip: "Noise-to-signal transition of a Brownian particle in the cubic potential: II. optical trapping geometry",
       Journal of Optics 18, 065402, 2016, ABSTRACT   DOWNLOAD

S. Obruca, P. Sedlacek, F. Mravec, O. Samek, I. Marova: "Evaluation of 3-hydroxybutyrate as an enzyme-protective agent against heating and oxidative damage and its potential role in stress response of poly(3-hydroxybutyrate) accumulating cells",
       Appl Microbiol Biotechnol 100, 1365-1376, 2016, ABSTRACT   DOWNLOAD

S. H. Simpson, L. Chvatal, P. Zemanek: "Synchronization of colloidal rotors through angular optical binding",
       Physical Review A 93, 023842, 2016, ABSTRACT   DOWNLOAD

M. Siler, J. Jezek, P. Jakl, Z. Pilat, P. Zemanek: "Direct measurement of the temperature profile close to an optically trapped absorbing particle",
       Optics Letters 41, 870-873, 2016, ABSTRACT   DOWNLOAD

Z. Tomori, P. Kesa, M. Nikorovic, J. Kanka, P. Jakl, M. Sery, S. Bernatova, E. Valusova, M. Antalik, P. Zemanek: "Holographic Raman tweezers controlled by multi-modal natural user interface",
       Journal of Optics 18, 015602, 2016, ABSTRACT   VIDEO1 - VIDEO2 - VIDEO3 - VIDEO4 - VIDEO5

B. R. Bzdek, R. M. Power, S. H. Simpson, J. P. Reid, C. P. Royall: "Precise, contactless measurement of the surface tension of picolitre aerosol droplets",
       Chemical Science 7, 274-285, 2016, DOI: 10.1039/c5sc03184b, ABSTRACT   DOWNLOAD

2015

K. Mlynarikova, O. Samek, S. Bernatova, F. Ruzicka, J. Jezek, A. Haronikova, M. Siler, P. Zemanek, V. Hola: "Influence of Culture Media on Microbial Fingerprints Using Raman Spectroscopy",
       Sensors 15(11), 29635-29647, 2015, ABSTRACT   DOWNLOAD

Z. Burdikova, Z. Svindrych, C. Hickey, M. G. Wilkinson, M. A. E. Auty, O. Samek, S. Bernatova, V. Krzyzanek, A. Periasamy, J. J. Sheehan: "Application of advanced light microscopic techniques to gain deeper insights into cheese matrix physico-chemistry",
       Dairy Science & Technology 95, 687-700, 2015, ABSTRACT   DOWNLOAD

O. Samek, A. Haronikova, N. Vaskovicova, K. Hrubanova, J. Jezek, I. Marova, V. Krzyzanek, P. Zemanek: "SEM and Raman Spectroscopy Applied to Biomass Analysis for Application in the Field of Biofuels and Food Industry",
       Microscopy and Microanalysis 21 (Suppl. 3), 1775-1776, 2015, ABSTRACT   DOWNLOAD

K. Hrubanova, S. Bernatova, O. Samek, M. Sery, P. Zemanek, J. Nebesarova, F. Ruzicka, V. Krzyzanek: Monitoring of Multilayered Bacterial Biofilm Morphology by Cryo-SEM for Raman Spectroscopy Measurements,
       Microscopy and Microanalysis 21 (Suppl. 3), 187-188, 2015, ABSTRACT   DOWNLOAD

V. Krzyzanek, K. Hrubanova, O. Samek, S. Obruca, I. Marova, S. Bernatova, M. Siler, P. Zemanek: "Cryo-SEM and Raman Spectroscopy Study of the Involvement of Polyhydroxyalkanoates in Stress Response of Bacteria",
       Microscopy and Microanalysis 21 (Suppl. 3), 183-184, 2015, ABSTRACT   DOWNLOAD

M. Siler and P. Zemanek: "Optical trapping in secondary maxima of focused laser beam",
       Journal of Quantitative Spectroscopy and Radiative Transfer 162, 114-121, 2015, ABSTRACT   DOWNLOAD

M. Baranek, P. Bouchal, M. Siler, Z. Bouchal: "Aberration resistant axial localization using a self-imaging of vortices",
       Optics Express 23, 15316-15331, 2015, ABSTRACT    DOWNLOAD

O. Brzobohaty, M. Siler, J. Trojek, L. Chvatal, V. Karasek, P. Zemanek: "Non-spherical gold nanoparticles trapped in optical tweezers: shape matters",
       Optics Express 23, 8179-8189, 2015, ABSTRACT   DOWNLOAD

L. Chvatal, O. Brzobohaty, P. Zemanek: "Binding of a pair of Au nanoparticles in a wide Gaussian standing wave",
       Optical Review, 1-5, 2015, ABSTRACT   DOWNLOAD

S. Box, L. Debono,D. B. Phillips, S. H. Simpson: "Transitional behavior in hydrodynamically coupled oscillators",
       Phys Rev E 91, 022916, 2015, ABSTRACT    DOWNLOAD

O. Samek, S. Bernatova, J. Jezek, M. Siler, M. Sery, V. Krzyzanek, K. Hrubanova, P. Zemanek, V. Hola, F. Ruzicka: "Identification of individual biofilm-forming bacterial cells using Raman tweezers",
       J. Biomed. Opt. 20, 051038, 2015, ABSTRACT    DOWNLOAD

O. Brzobohaty, A. V. Arzola, M. Siler, L. Chvatal, P. Jakl, S. Simpson, P. Zemanek "Complex rotational dynamics of multiple spheroidal particles in a circularly polarized, dual beam trap",
       Optics Express 22, 7273-7287, 2015, ABSTRACT   DOWNLOAD

       Highlighted in the Virtual Journal for Biomedical Optics

O. Brzobohaty, M. Siler, J. Trojek, L. Chvatal, V. Karasek, A. Patak, Z. Pokorna, F. Mika, P. Zemanek: "Three-Dimensional Optical Trapping of a Plasmonic Nanoparticle using Low Numerical Aperture Optical Tweezers",
       Scientific Reports 5, 8106, 2015, ABSTRACT   DOWNLOAD

2014

O. Samek, K. Mlynarikova, S. Bernatova, J. Jezek, V. Krzyzanek, M. Siler, P.Zemanek, F. Ruzicka, V. Hola, M. Mahelova: "Candida parapsilosis Biofilm Identification by Raman Spectroscopy",
       Int. J. Mol. Sci. 15, 23924-23935, 2014, ABSTRACT   DOWNLOAD

P. Jakl, A. V. Arzola, M. Siler, L. Chvatal, K. Volke-Sepulveda, P. Zemanek: "Optical sorting of nonspherical and living microobjects in moving interference structures",
       Optics Express 22, 29746-29760, 2014, ABSTRACT   DOWNLOAD

       Highlighted in the Virtual Journal for Biomedical Optics

P. Porizka, P. Prochazková, D. Prochazka, L. Sládková, J. Novotný, M. Petrilak, M. Brada, O. Samek, Z. Pilát, P. Zemánek, V. Adam, R. Kizek, K. Novotný, J. Kaiser: "Algal Biomass Analysis by Laser-Based Analytical Techniques—A Review",
       Sensors 14, 17725-17752, 2014, ABSTRACT   DOWNLOAD

A. V. Arzola, P. Jakl, L. Chvatal, P.Zemanek: "Rotation, oscillation and hydrodynamic synchronization of optically trapped oblate spheroidal microparticles",
       Optics Express 22, 16207-1622, 2014, ABSTRACT   DOWNLOAD

2013

S. Bernatova, O. Samek, Z. Pilat, M. Sery, J. Jezek, P. Jakl, M. Siler, V. Krzyzanek, P. Zemanek, V. Hola, M. Dvorackova, F. Ruzicka: "Following the mechanisms of bacteriostatic versus bacericidal action using Raman spectroscopy",
       Molecules 18(11), 13188-13199, 2013, ABSTRACT   DOWNLOAD

O. Brzobohaty, M. Siler, J. Jezek, P. Jakl, P. Zemanek: "Optical manipulation of aerosol droplets using a holographic dual and single beam trap",
       Optics Letters 38, Iss. 22, 4601-4604, 2013, ABSTRACT   
       Highlighted in the Virtual Journal for Biomedical Optics

M. Aas, A. Jonas, A. Kiraz, O. Brzobohaty, J. Jezek, Z. Pilat, P. Zemanek: Spectral tuning of lasing emission from optofluidic droplet microlasers using optical stretching",
       Optics Express 21, 21381-21394, 2013, ABSTRACT   DOWNLOAD

A. V. Arzola, K. Volke-Sepulveda, J. L. Mateos: "Dynamical analysis of an optical rocking ratchet: Theory and experiment",
       Physical Review E 87, 062910:1-9, 2013, ABSTRACT

Z. Tomori, M. Antalik, P. Kesa, J. Kanka, P. Jakl, M. Sery, S. Bernatova, P. Zemanek: "Holographic Raman tweezers controlled by hand gestures and voice commands",
       Optics and Photonics Journal 3, 331-336, 2013, ABSTRACT   DOWNLOAD

O. Brzobohaty, V. Karasek, M. Siler, L. Chvatal, T. Cizmar, P. Zemanek: "Experimental demonstration of optical transport, sorting and self-arrangement using a 'tractor beam'"
       Nature Photonics 7 , 123-127, 2013, ABSTRACT

Z. Pilat, J. Jezek, M. Sery, M. Trtilek, L. Nedbal, P. Zemanek: "Optical trapping of microalgae at 735-1064 nm: Photodamage assessment",
       Journal of Photochemistry and Photobiology B: Biology 121, 27-31, 2013, ABSTRACT    DOWNLOAD

M. Siler and P. Zemanek: "Optical forces in a non-diffracting vortex beam",
       Journal of Quantitative Spectroscopy and Radiative Transfer 126, 78-83, 2013,   ABSTRACT   DOWNLOAD

M. Siler, L. Chvatal and P. Zemanek: "Metallic nanoparticles in a standing wave: Optical force and heating"
       Journal of Quantitative Spectroscopy and Radiative Transfer 126, 84-90, 2013,   ABSTRACT   DOWNLOAD

2012

L. Caballero, M Benitez, E. R. Alvarez-Buylla, S. Hernandez, A. V. Arzola and G. Cocho: "An epigenetic model for pigment patterning based on mechanical and cellular interactions"
       Journal of Experimental Zoology 318 , 209-223, 2012,   DOWNLOAD

M. Siler, P. Jakl, O. Brzobohaty, and P. Zemanek: "Optical forces induced behavior of a particle in a non-diffracting vortex beam",
       Optics Express 20, 24304-24319, 2012,   ABSTRACT   DOWNLOAD

P. Porizka, D. Prochazka, Z. Pilat, L. Krajcarova, J. Kaiser, R. Malina, J. Novotny, P. Zemanek, J. Jezek, M. Sery, S. Bernatova, V. Krzyzanek, K. Dobranska, K. Novotny, M. Trtilek, O. Samek: "Application of laser-induced breakdown spectroscopy to the analysis of algal biomass for industrial biotechnology",
       Spectrochimica Acta Part B: Atomic Spectroscopy 74-75, 169-176, 2012,   DOWNLOAD

O. Samek, P. Zemanek, S. Bernatova, Z. Pilat and H. H. Telle: "Following lipids in the food chain: determination of the iodine value using Raman micro-spectroscopy",
       Spectroscopy Europe 24, 18-21, 2012,   ABSTRACT   DOWNLOAD

J. Trojek, L. Chvatal and P. Zemanek: "Optical alignment and confinement of an ellipsoidal nanorod in optical tweezers: a theoretical study"
       J. Opt. Soc. Am. A 29, 1224-1236, 2012,   ABSTRACT   DOWNLOAD

M. Siler, T. Cizmar and P. Zemanek: "Speed enhancement of multi-particle chain in a traveling standing wave",
       Applied Physics Letters 100, 051103, 2012,   ABSTRACT   DOWNLOAD   MULTIMEDIA

Z. Pilat, S. Bernatova, J. Jezek, M. Sery, O. Samek, P. Zemanek, L. Nedbal and M. Trtilek: "Raman microspectroscopy of algal lipid bodies: beta-carotene quantification",
       Journal of Applied Phycology 24, 541-546, 2012,   ABSTRACT   DOWNLOAD

2011

O. Samek, P. Zemanek, A. Jonas, and H. H. Telle: "Characterization of oil-producing microalgae using Raman spectroscopy",
       Laser Physics Letters 8, 701-709, 2011, ABSTRACT   DOWNLOAD

O. Brzobohaty, V. Karasek, M. Siler, J. Trojek, and P. Zemanek: "Static and dynamic behavior of two optically bound microparticles in a standing wave",
       Optics Express 19, 19613-19626, 2010, ABSTRACT    DOWNLOAD
       Highlighted in the Virtual Journal for Biomedical Optics

O. Brzobohaty, V. Karasek, T. Cizmar, and P. Zemanek: "Dynamic size tuning of multidimensional optically bound matter",
       Applied Physics Letters 99, 101105, 2011, ABSTRACT    DOWNLOAD

M. Siler, and P. Zemanek: "Parametric study of optical forces acting upon nanoparticles in a single, or a standing, evanescent wave",
       Journal of Optics 13, 044016, 2011, ABSTRACT   DOWNLOAD

T. Cizmar, O. Brzobohaty, K. Dholakia, and P. Zemanek: "The holographic optical micro-manipulation system based on counter-propagating beams",
       Laser Physics Letters 8, 50-56, 2011, ABSTRACT   DOWNLOAD

2010

O. Brzobohaty, T. Cizmar, V. Karasek, M. Siler, K. Dholakia, and P. Zemanek: "Experimental and theoretical determination of optical binding forces",
       Optics Express 18, 25389-25402, 2010, ABSTRACT   DOWNLOAD

O. Samek, A. Jonas, Z. Pilat, P. Zemanek, L. Nedbal, J. Triska, P. Kotas, and M. Trtilek: "Raman microspectroscopy of individual algal cells: Sensing unsaturation of storage lipids in vivo",
       Sensors 10, 8635-8651, 2010, ABSTRACT   DOWNLOAD

A. Jonas, A. C. De Luca, G. Pesce, G. Rusciano, A. Sasso, S. Caserta, S. Guido, and G. Marrucci: "Diffusive mixing of polymers investigated by Raman microspectroscopy and microrheology",
       Langmuir 26, 14223-14230, 2010, ABSTRACT   DOWNLOAD

M. Siler, and P. Zemanek: "Particle jumps between optical traps in a one-dimensional (1D) optical lattice",
       New Journal of Physics 12, 083001, 2010, ABSTRACT   DOWNLOAD

K. Dholakia, and P. Zemanek: "Colloquium: Gripped by light: Optical binding",
       Reviews of Modern Physics 82, 1767-1791, 2010, ABSTRACT   DOWNLOAD

O. Samek, J. F. M. Al-Marashi, and H. H. Telle: "The potential of Raman spectroscopy for the identification of biofilm formation by Staphylococcus epidermidis",
       Laser Physics Letters 7, 378-383, 2010, ABSTRACT   DOWNLOAD

2009

Pinyu Wu, Rongxin Huang, Christian Tischer, Alexandr Jonas, and Ernst-Ludwig Florin: "Direct measurement of the nonconservative force field generated by optical tweezers",
       Physical Review Letters 103, 108101, 2009, ABSTRACT

T. F. Bartsch, S. Fisinger, M. D. Kochanczyk, R. Huang, A. Jonas, E.-L. Florin: Detecting sequential bond formation using three-dimensional thermal fluctuation analysis,
       ChemPhysChem 10, 1541-1547, 2009, ABSTRACT

J. Trojek, V. Karasek, P. Zemanek: "Extreme axial optical force in a standing wave achieved by optimized object shape",
       Optics Express 17, 10472-10488, 2009,ABSTRACT   DOWNLOAD

V. Karasek, O. Brzobohaty, P. Zemanek: "Longitudinal optical binding of several spherical particles studied by the coupled dipole method",
       Journal of Optics A: Pure and Applied Optics 11, 034009, 2009, DOWNLOAD

2008

A. Jonas, P. Zemanek: "Light at work: The use of optical forces for particle manipulation, sorting, and analysis",
       Electrophoresis 29, 4813-4851, 2008, ABSTRACT   DOWNLOAD

M. Siler, T. Cizmar, A. Jonas, P. Zemanek: "Surface delivery of a single nanoparticle under moving evanescent standing-wave illumination",
       New Journal of Physics 10, 1130101:1-16, 2008, ABSTRACT   DOWNLOAD

V. Karasek, T. Cizmar, O. Brzobohaty, P. Zemanek, V. Garces-Chavez, K. Dholakia: "Long-range one-dimensional longitudinal optical binding",
       Physical Review Letters 101, 143601:1-4, 2008, ABSTRACT   DOWNLOAD

O. Brzobohaty, T. Cizmar, P. Zemanek: "High quality quasi-Bessel beam generated by round-tip axicon",
       Optics Express 16, 12688-12700, 2008, ABSTRACT   DOWNLOAD

P. Jakl, T. Cizmar, M. Sery, P. Zemanek: "Static optical sorting in a laser interference field",
       Applied Physics Letters 92, 161110:1-3, 2008, ABSTRACT   DOWNLOAD

2007

G. Milne, K. Dholakia, D. McGloin, K. Volke-Sepulveda, P. Zemanek: "Transverse particle dynamics in a Bessel beam",
       Optics Express 15, 13972--13987, 2007, ABSTRACT   DOWNLOAD

K. Dholakia, M. P. MacDonald, P. Zemanek, T. Cizmar: "Cellular and colloidal separation using optical forces",
        Methods in Cell Biology 82, 467--495, 2007, ABSTRACT

T. Cizmar, P. Zemanek: "Optical tracking of spherical micro-objects in spatially periodic interference fields",
       Optics Express 15, 2262-2272, 2007,  
ABSTRACT   DOWNLOAD   MULTIMEDIA 

P. Jakl, M. Sery, J. Jezek, M. Liska, P. Zemanek: "Axial optical trap stiffness influenced by retro-reflected beam",
       Journal of Optics A: Pure and Applied Optics 9, S251-S255, 2007, DOWNLOAD

V. Karasek, P. Zemanek: "Analytical description of longitudinal optical binding of two nanoparticles",
       Journal of Optics A: Pure and Applied Optics 9, S215-S220, 2007, DOWNLOAD

M. Siler, P. Zemanek: "Optical forces acting on a nanoparticle placed into an interference evanescent field"
       Optics Communications 275, 409-420, 2007,  DOWNLOAD

P. Jakl, M. Sery, J. Jezek,  P. Zemanek, P. Ormos, S. Valkai, L.Kelemen: "Opto-fluidic micromanipulation system based on integrated polymer waveguides",
       Journal of Optoelectronics and Advanced Materials 9, 2148-2151, 2007, DOWNLOAD

2006

J. Jezek, T. Cizmar, V. Nedela, P. Zemanek: "Formation of long and thin polymer fiber using nondiffracting beam",
       Optics Express 14, 8506-8515, 2006,  ABSTRACT   DOWNLOAD

T. Cizmar, M. Siler, M. Sery, P. Zemanek, V. Garces-Chavez, K. Dholakia: "Optical sorting and detection of submicrometer objects in a motional standing wave",
       Physical Review B 74, 035105:1-6, 2006,   ABSTRACT   DOWNLOAD

V. Karasek, K. Dholakia, P. Zemanek: "Analysis of optical binding in one dimension",
       Applied Physics B 84, 149-156, 2006, DOWNLOAD

M. Siler, T. Cizmar, M. Sery, P. Zemanek: "Optical forces generated by evanescent standing waves and their usage for sub-micron particle delivery",
       Applied Physics B 84, 157-165, 2006,  DOWNLOAD

T. Cizmar, M. Siler, P. Zemanek: "An optical nanotrap array movable over a milimetre range",
       Applied Physics B 84, 197-203, 2006,  DOWNLOAD

T. Cizmar, V. Kollarova, Z. Bouchal, P. Zemanek: "Sub-micron particle organization by self-imaging of non-diffracting beams",
       New Journal of Physics 8, 43:1-23, 2006,   LINK TO JOURNAL   ABSTRACT   DOWNLOAD   MULTIMEDIA

2005 and earlier

A. Casaburi, G. Pesce, P. Zemanek, A. Sasso: "Two- and three-beam interferometric optical tweezers",
       Optics Communications 251, 393-404, 2005,  DOWNLOAD

T. Cizmar, V. Garces-Chavez, K. Dholakia, P. Zemanek: "Optical conveyor belt for delivery of submicron objects",
       Applied Physics Letters 86, 174101-1, 2005, DOWNLOAD

P. Zemanek, V. Karasek, A. Sasso: "Optical forces acting on Rayleigh particle placed into interference field",
       Optics Communications 240, 401-415, 2004, DOWNLOAD

P. Jakl, M. Sery, J. Jezek, A. Jonas, M. Liska, P. Zemanek: "Behaviour of an optically trapped probe approaching a dielectric interface",
       Journal of Modern Optics 50, 1615-1625, 2003, DOWNLOAD

P. Zemanek, A. Jonas, P. Jakl, J. Jezek, M. Sery, M. Liska: "Theoretical comparison of optical traps created by standing wave and single beam",
       Optics Communications 220, 401-412, 2003, DOWNLOAD

P. Zemanek, A. Jonas, M. Liska: "Simplified description of optical forces acting on a nanoparticle in the Gaussian standing wave",
        Journal of the Optical Society of America A 19, 1025-1034, 2002, DOWNLOAD

A. Jonas, P. Zemanek, E.-L. Florin: "Single-beam trapping in front of reflective surfaces",
        Optics Letters 26, 1466-1468, 2001,  DOWNLOAD

P. Zemanek, A. Jonas, L. Sramek, M. Liska: " Optical trapping of nanoparticles and microparticles by a Gaussian standing wave",
       Optics Letters, 24, 1448-1450, 1999.  DOWNLOAD

P. Zemanek, A. Jonas, L. Sramek, M. Liska, : "Optical trapping of Rayleigh particles using Gaussian standing wave.",
       Optics Communications, 151, 273-285, 1998.  DOWNLOAD

P. Zemanek, C. J. Foot : "Atomic dipole trap formed by blue detuned strong Gaussian standing wave",
       Optics Communications 146, 119-123, 1998.  DOWNLOAD


Local journals              Top

P. Zemánek, P. Jákl, O. Brzobohatý: "Silové působení laserových svazků na nesférické objekty",
       Ceskoslovensky casopis pro fyziku 65, 355-358, 2015   DOWNLOAD

J. Jezek, Z. Pilat, M. Sery, J. Kanka, O. Samek, S. Bernatova, P. Zemanek: "Microfluidic devices for analysis and active optical sorting of individual cells",
       Jemna mechanika a optika 58, 55-59, 2013.

F. Růžička, M. Horká, O. Samek: "Mové možnosti detekce a identifikace klinicky významných mikromycet",
       Postgraduální medicína 14(5), 45-50, 2012

P. Zemanek, P. Jakl: "Prakticka vyuziti silovych ucinku svetla",
       Ceskoslovensky casopis pro fyziku 62, 84-90, 2012    DOWNLOAD

P. Zemanek, J. Lazar, O. cip, L. Oprchalova, J. Krsek, D. Vavrouch: "Cesty a osudy laseru v Ustavu pristrojove techniky v Brne",
       Ceskoslovensky casopis pro fyziku 60, 210-220, 2010   DOWNLOAD

P. Zemanek, A. Jonas, J. Jezek, P. Jakl, M. Sery, T. Cizmar, V. Karasek, M. Siler, O. Brzobohaty, J. Trojek: "Laborator optickych mikromanipulacnich technik – nove vyzkumne smery",
       Jemna mechanika a optika 53, 6-10, 2008,   DOWNLOAD

M. Sery, Z. Lostak, M. Kalman, P. Jakl, P. Zemanek: "Kompaktni opticka pinzeta",
       Jemna mechanika a optika 51, 316-319, 2006,  DOWNLOAD

P. Zemanek, P. Jakl, J. Jezek, M. Sery, V. Karasek, T. Cizmar, M. Siler: Laborator optickych mikromanipulacnich technik UPT AV CR",
       Jemna mechanika a optika 51, 7-10, 2006,   DOWNLOAD

Moravcik Z., Janisch R., Jezek J., Zemanek P.: "Response of infusorian cells to injury caused by a laser microbeam",
       SCRIPTA MEDICA (BRNO) . 76 (3): 149.162, June 2003,    ABSTRACT

M. Sery, P. Jakl, J. Jezek, M. Liska, P. Zemanek: "Vyuziti vice opticky zachycenych sond pro mereni profilu nepristupnych pruhlednych povrchu",
       Jemna mechanika a optika 48, 170-173, 2003

P. Zemanek, C. J. Foot : "Laser cooling of atoms in a strong Gaussian standing wave",
       Jemna Mechanika a Optika 41, 111-118, 1996   ABSTRACT


Conference proceedings              Top

2014

P. Jakl, A. V. Arzola, P. Zemanek: "In-situ aberration correction of Bessel beams using spatial light modulator",
       Proceedings of SPIE 9442, 94420G, 2014, Optics and Measurement Conference 2014,   ABSTRACT

A. V. Arzola, P. Jakl, L. Chvatal, M. Sery, P. Zemanek: "Behavior of oblate spheroidal microparticles in a tightly focused optical vortex beam",
       Proceedings of SPIE 9164, 91640L, 2014, Optical Trapping and Optical Micromanipulation XI,   ABSTRACT

O. Brzobohaty, J. Kanka, L. Chvatal, P. Zemanek, D. Ou-Yang: "Micro-particles self-arrangement in shapeable counter-propagating beams",
       Proceedings of SPIE 9164, 91642L, 2014, Optical Trapping and Optical Micromanipulation XI,   ABSTRACT

M. Sery, Z. Pilat, J. Jezek, M. Aas, A. Kiraz, P. Zemanek: "Tunable WGM resonators from optically trapped dye doped liquid crystal emulsion droplets",
       Proceedings of SPIE 9164, 916434, 2014, Optical Trapping and Optical Micromanipulation XI,   ABSTRACT

M. Siler, P. Jakl, O. Brzobohaty, J. Jezek, P. Zemanek: "Anomalous behavior of a three-dimensional, optically trapped, super-paramagnetic particle",
       Proceedings of SPIE 9164, 916436, 2014, Optical Trapping and Optical Micromanipulation XI,   ABSTRACT

Z. Tomori, J. Kanka, P. Kesa, P. Jakl, M. Sery, S. Bernatova, M. Antalik, P. Zemanek: "Natural user interface as a supplement of the holographic Raman tweezers",
       Proceedings of SPIE 9164, 91642P, 2014, Optical Trapping and Optical Micromanipulation XI,   ABSTRACT

S. Bernatova, O. Samek, Z. Pilat, M. Sery, J. Jezek, P. Jakl, M. Siler, V. Krzyzanek, P. Zemanek, V. Hola, M. Dvorackova, F. Ruzicka: "Raman tweezers on bacteria: following the mechanisms of bacteriostatic versus bactericidal action",
       Proceedings of SPIE 9129, 91291Y, 2014, Biophotonics: Photonic Solutions for Better Health Care IV,   ABSTRACT

O. Brzobohaty, M. Siler, L. Chvatal, V. Karasek, P. Zemanek: "Behaviour of a non-spherical metal nanoparticle in an optical trap",
       Proceedings of SPIE 9441, 944102, 2014, 19th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

O. Brzobohaty, V. Karasek, M. Siler, L. Chvatal, T. Cizmar, P. Zemanek: "Tractor beam in micro-scale",
       Proceedings of SPIE 9441, 944104, 2014, 19th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

L. Chvatal, M. Siler, P. Zemanek: "Manipulation of metal-dielectric core-shell particles in optical fields",
       Proceedings of SPIE 9441, 944106, 2014, 19th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

P. Jakl, M. Siler, P. Zemanek: "Experimental analysis of multiple-beam interference optical traps",
       Proceedings of SPIE 9441, 944105, 2014, 19th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

J. Jezek, Z. Pilat, O. Brzobohaty, A. Jonas, M. Aas, A. Kiraz, P. Zemanek: "Liquid crystal emulsion micro-droplet WGM resonators",
       Proceedings of SPIE 9441, 944108, 2014, 19th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

V. Karasek, P. Zemanek: "Particles in motion driven by optical binding",
       Proceedings of SPIE 9441, 944103, 2014, 19th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

Z. Pilat, J. Jezek, J. Kanka, P. Zemanek: "Raman tweezers in microfluidic systems for analysis and sorting of living cells",
       Proceedings of SPIE 9441, 944107, 2014, 19th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

O. Samek, K. Mlynarikova, S. Bernatova, J. Jezek, V. Krzyzanek, M. Siler, P. Zemanek, F. Ruzicka: "Reproducible and time-course study of yeast biofilm by Raman spectroscopy",
       Proceedings of SPIE 9441, 94411M, 2014, 19th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

O. Brzobohaty, M. Siler, L. Chvatal, V. Karasek, P. Zemanek: "Optical trapping of non-spherical plasmonic nanoparticles",
       Proceedings of SPIE 8999, 899909, 2014, Complex Light and Optical Forces VIII,   ABSTRACT

M. Siler, O. Brzobohaty, P. Jakl, V. Karasek, P. Zemanek: "Single-beam trapping using laser beams focused by low and high numerical apertures: angular spectrum approach",
       Proceedings of SPIE 8999, 899904, 2014, Complex Light and Optical Forces VIII,   ABSTRACT

A. Kiraz, A. Jonas, M. Aas, Y. Karadag, O. Brzobohaty, J. Jezek, Z. Pilat, P. Zemanek, S. Anand, D. McGloin: "Droplet resonator based optofluidic microlasers",
       Proceedings of SPIE 8960, 896015, Laser Resonators, Microresonators, and Beam Control /16./,   ABSTRACT

Z. Pilat, J. Jezek, J. Kanka, P. Zemanek: "Raman tweezers in microfluidic systems for analysis and sorting of living cells",
       Proceedings of SPIE 8947, 89471M, 2014, Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues (12),   ABSTRACT

O. Samek, P. Zemanek, S. Bernatova, J. Jezek, M. Sery, P. Jakl, M. Siler, F. Ruzicka: "Monitoring the influence of antibiotic exposure using Raman spectroscopy",
       Proceedings of SPIE 8939, 89390P, 2014, Biomedical Vibrational Spectroscopy VI: Advances in Research and Industry,   ABSTRACT

2013

M. Aas, A. Jonas, A. Kiraz, O. Brzobohaty, J. Jezek, Z. Pilat, P. Zemanek: "Tunable optofluidic microlasers based on optically stretched emulsion droplets",
       Proceedings of SPIE 8810, 88101Y, 2013, Optical Trapping and Optical Micromanipulation X,   ABSTRACT

O. Brzobohaty, V. Karasek, M. Siler, L. Chvatal, T. Cizmar, P. Zemanek: "Experimental demonstration of optical transport, sorting and aself arrangement using a 'tractor beam'",
       Proceedings of SPIE 8810, 881003, 2013, Optical Trapping and Optical Micromanipulation X,   ABSTRACT

O. Brzobohaty, V. Karasek, M. Siler, L. Chvatal, T. Cizmar, P. Zemanek: "Single laser beam based passive optical sorter",
       Proceedings of SPIE 8637, 863715, 2013, Complex Light and Optical Forces VII part of Photonics West,   ABSTRACT

V. Karasek, P. Zemanek: "Optical sorting due to optical binding",
       Proceedings of SPIE 8810, 881027, 2013, Optical Trapping and Optical Micromanipulation X,   ABSTRACT

2012

M. Siler, P. Jakl, L. Chvatal, P. Zemanek: "Optical forces in higher order Bessel beam",
       Proceedings of SPIE 8697, 86970Q, 2012, 18th Czech-Polish-Slovak Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

L. Chvatal, M. Siler, P. Zemanek: "Metallic Core-shell particle in a standing wave",
       Proceedings of SPIE 8697, 86970S, 2012, 18th Czech-Polish-Slovak Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

V. Karasek, P. Zemanek: "Optical binding of unlike particles",
       Proceedings of SPIE 8697, 86970T, 2012, 18th Czech-Polish-Slovak Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

O. Brzobohaty, V. Karasek, M. Siler, P. Zemanek: "Dynamic size tuning of multidimensional optically bound matter",
       Proceedings of SPIE 8697, 86970U, 2012, 18th Czech-Polish-Slovak Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

P. Zemanek, M. Siler, T. Cizmar: "Behaviour of self-arranged chain of colloidal particles in a travelling standing wave",
       Proceedings of SPIE 8697, 86970V, 2012, 18th Czech-Polish-Slovak Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

J. Jezek, Z. Pilat, M. Sery, J. Kanka, O. Samek, S. Bernatova, P. Zemanek: "Microfluidic systems for optical sorting",
       Proceedings of SPIE 8697, 86970W, 2012, 18th Czech-Polish-Slovak Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

S. Bernatova, O. Samek, Z. Pilat, M. Sery, J. Jezek, V. Krzyzanek, P. Zemanek, F. Ruzicka: "Raman spectroscopy for bacterial identification and characterization",
       Proceedings of SPIE 8697, 86970Y, 2012, 18th Czech-Polish-Slovak Optical Conference on Wave and Quantum Aspects of Contemporary Optics,   ABSTRACT

A. V. Arzola, M. Siler, O. Brzobohaty, P. Zemanek: "Rotation of microscopic discs by the angular momentum of light",
       Proceedings of SPIE 8458, 84582U:1-9, 2012, Optical Trapping and Optical Micromanipulation IX, San Diego(US), 12 - 16 Aug 2012,   ABSTRACT

L. Chvatal, M. Siler, P. Zemanek: "Optical trapping of metallic and core-shell particles in a 1D standing wave",
       Proceedings of SPIE 8458, 845839:1-8, 2012, Optical Trapping and Optical Micromanipulation IX, San Diego(US), 12 - 16 Aug 2012,   ABSTRACT

M. Siler, T. Cizmar, P. Zemanek: "Faster optical delivery of self-arranged multi-particle cluster",
       Proceedings of SPIE 8458, 84581K:1-7, 2012, Optical Trapping and Optical Micromanipulation IX, San Diego(US), 12 - 16 Aug 2012,   ABSTRACT

O. Brzobohaty, M. Siler, P. Zemanek: "Optical manipulation of airborne particles using flexible dual-beam trap",
       Proceedings of SPIE 8458, 84582C:1-7, 2012, Optical Trapping and Optical Micromanipulation IX, San Diego(US), 12 - 16 Aug 2012,   ABSTRACT

2011

P. Jakl, M. Sery, P. Zemanek: "Multiple Probe Photonic Force Microscopy",
       Conference Proceedings 1369:1-6, NANOCON 2011, International Conference (3.), Brno(CZ), 21 -23 Sep 2011

O. Brzobohaty, T. Cizmar, V. Karasek, P. Zemanek: "Advanced optical manipulation with tailored counter-propagating laser beams",
       Proceedings of SPIE 8306, 83061D:1-8, 2011, Photonics, Devices, and Systems V, Praha (CZ), 24 - 26 Aug 2011

O. Brzobohaty, V. Karasek, T. Cizmar, P. Zemanek: "Demonstration of multi-dimensional optical binding in counter-propagating laser beams with variable beam properties",
       Proceedings of SPIE 8097, 80970U:1-8, 2011, Optical Trapping and Optical Micromanipulation VIII, San Diego(US), 21 - 25 Aug 2011

O. Samek, Z. Pilat, A. Jonas, P. Zemanek, M. Sery, J. Jezek, S. Bernatova, L. Nedbal, M. Trtilek: "Characterization of microorganisms using Raman tweezers",
       Proceedings of SPIE 8097, 80970F:1-7, 2011, Optical Trapping and Optical Micromanipulation VIII, San Diego(US), 21 - 25 Aug 2011

M. Siler, V. Karasek, O. Brzobohaty, T. Cizmar, P. Zemanek: "Modelling of optical trapping",
       Proceedings of SPIE 8007, 80071C:1-10, Photonics North 2011, Ottawa(CA), 16 - 18 May 2011

O. Samek, Z. Pilat, A. Jonas, P. Zemanek, M. Sery, J. Jezek, S. Bernatova, L. Nedbal, M. Trtilek: "Raman microspectroscopy based sensor of algal lipid unsaturation",
       Proceedings of SPIE 8073, 80730O:1-6, 2011, Optical Sensors 2011 and Photonic Crystal Fibers V, Praha(CZ), 18-20 Apr 2011

Z. Pilat, S. Bernatova, J. Jezek, M. Sery, O. Samek, P. Zemanek, L. Nedbal, M. Trtilek: "Raman microspectroscopy of algal lipid bodies: ??-carotene as a volume sensor",
       Proceedings of SPIE 8306, 83060L:1-7, 2011, Photonics, Devices, and Systems V, Praha(CZ), 24 - 26 Aug 2011


2010

O. Brzobohaty, T. Cizmar, K. Dholakia, P. Zemanek: "Flexible dual-beam geometry for advanced optical micromanipulation experiments",
       Proceedings of SPIE 7746, 77461C:1-9, 2010, 17th Slovak-Czech-Polish Optical Conference on Wave and Quantum Aspects of Contemporary Optics, Liptovsky Jan (SK), 6 Sep 2010DOWNLOAD

O. Brzobohaty, V. Karasek, P. Zemanek, T. Cizmar, K. Dholakia: "Formation of one-dimensional optically bound structures of polystyrene particles near the surface",
       Proceedings of SPIE 7762, 776212:1-7, 2010, Optical Trapping and Optical Micromanipulation VII, San Diego(CA), 1 Aug 2010

P. Jakl, A. V. Arzola, P. Zemanek, M. Siler, K. Volke-Sepulveda: "Particles dynamics in travelling optical lattices",
       Proceedings of SPIE 7762, 77620Y:1-6, 2010, Optical Trapping and Optical Micromanipulation VII, San Diego(CA), 1 Aug 2010

O. Samek, A. Jonas, Z. Pilat, P. Zemanek, L. Nedbal, J. Triska, P. Kotas, M. Trtilek: "Raman spectroscopy for the characterization of algal cells",
       Proceedings of SPIE 7746, 77460X:1-7, 2010, 17th Slovak-Czech-Polish Optical Conference on Wave and Quantum Aspects of Contemporary Optics, Liptovsky Jan (SK), 6 Sep 2010DOWNLOAD

M. Sery, Z. Pilat, A. Jonas, J. Jezek, P. Jakl, P. Zemanek, O. Samek, L. Nedbal, M. Trtilek: "Active sorting switch for biological objects",
       Proceedings of SPIE 7762, 776210:1-7, 2010, Optical Trapping and Optical Micromanipulation VII, San Diego(CA), 1 Aug 2010,   DOWNLOAD

M. Siler, P. Zemanek: "Particle escape over a potential barrier in 1D optical potential energy landscape",
       Proceedings of SPIE 7762, 776214:1-8, 2010, Optical Trapping and Optical Micromanipulation VII, San Diego(CA), 1 Aug 2010


2009

P. Jakl, P. Zemanek: "Particle dynamics in optical lattices",
       Proceedings of SPIE 7400, 74000K, 2009, Optical Trapping and Optical Micromanipulation VI, San Diego(CA), 2-6 Aug 2009

J. Trojek, V. Karasek, P. Zemanek: "Optimization of an object shape to achieve extremal axial optical force in a standing wave",
       Proceedings of SPIE 7400, 74000L, 2009, Optical Trapping and Optical Micromanipulation VI, San Diego(CA), 2-6 Aug 2009 DOWNLOAD

P. Zemanek, O. Brzobohaty, V. Karasek, J. Trojek: "Particles collective effects in counter-propagating Bessel beams",
       Proceedings of SPIE 7400, 74001K, 2009, Optical Trapping and Optical Micromanipulation VI, San Diego(CA), 2-6 Aug 2009 DOWNLOAD

2008

T. Cizmar, P. Zemanek, M. Siler et al.: "Laser beam interference and its applications in optical micromanipulations",
       Proceedings of SPIE 7062, 70620U, 2008, Conference on Laser Beam Shaping IX, San Diego(CA), 11-12 Aug 2008

M. Sery, A. Pochyly, Z. Lostak, P. Jakl, P. Zemanek: "Light microscopy adapter for laser based microscopy techniques",
       Proceedings of SPIE 7141, 71410d:1-7, 2008, 16th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics, Polanica-Zdroj(PL), 8-12 Sep 2008 DOWNLOAD

A. Jonas, J. Jezek, M. Sery, P. Zemanek: "Raman microspectroscopy of optically trapped micro- and nanoobjects",
       Proceedings of SPIE 7141, 714111:1-8, 2008, 16th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics, Polanica-Zdroj(PL), 8-12 Sep 2008DOWNLOAD

P. Jakl, M. Sery, P. Zemanek: "Mechanical effects of interference light field on dielectric microparticles",
       Proceedings of SPIE 7141, 714112:1-6, 2008, 16th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics, Polanica-Zdroj(PL), 8-12 Sep 2008

O. Brzobohaty, V. Karasek, T. Cizmar, P. Zemanek, V. Garces-Chavez, K. Dholakia: "One-dimensional long-range self-arranged optically bound structures",
       Proceedings of SPIE 7141, 714113:1-9, 2008, 16th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics, Polanica-Zdroj(PL), 8-12 Sep 2008DOWNLOAD

J. Trojek, V. Karasek, P. Zemanek: "Optimization of axial optical force acting on an array of overlapping spheres".
       Proceedings of SPIE 7141, 714114:1-9, 2008, 16th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics, Polanica-Zdroj(PL), 8-12 Sep 2008DOWNLOAD

O. Brzobohaty, T. Cizmar, P. Zemanek: "Quasi-Bessel beam generated by oblate-tip axicon",
       Proceedings of SPIE 7141, 714126:1-10, 2008, 16th Polish-Slovak-Czech Optical Conference on Wave and Quantum Aspects of Contemporary Optics, Polanica-Zdroj(PL), 8-12 Sep 2008DOWNLOAD

O. Brzobohaty, V. Karasek, T. Cizmar, P. Zemanek, V. Garces-Chavez, K. Dholakia: "Stability and dynamics of self-arranged structures in longitudinal optical binding",
       Proceedings of SPIE 7038, 70380O:1-9, 2008, Optical Trapping and Optical Micromanipulation V, San Diego(CA, USA), 10-14 Aug 2008DOWNLOAD

M. Siler, T. Cizmar, A. Jonas, P. Zemanek: "Delivery of multi-particle chains by an optical conveyor belt",
       Proceedings of SPIE 7138, 713822:1-6, 2008, Photonics, Devices, and Systems IV, Prague(CZ), 27-29 Aug 2008

P. Zemanek, O. Brzobohaty, V. Karasek, T. Cizmar, V. Garces-Chavez, K. Dholakia: "Optically bound chain of microparticles",
       Proceedings of SPIE 7138, 713825:1-7, 2008, Photonics, Devices, and Systems IV, Prague(CZ), 27-29 Aug 2008DOWNLOAD

2007

P. Zemanek, T. Cizmar, M. Siler, V. Garces-Chavez, K. Dholakia, V. Kollarova, Z. Bouchal: "How to use laser radiative and evanescent interference fields to control movement of the sub-micron objects",
       Proceedings of SPIE 6609, 660902:1-14, 2007, 15th Czech-Polish-Slovak Conference on Wave and Quantum Aspects of Contemporary Optics, Liberec(CZ), 11-15 Sep 2006DOWNLOAD

Z. Bouchal, V. Kollarova, P. Zemanek, T. Cizmar: "Orbital angular momentum of mixed vortex beams",
       Proceedings of SPIE 6609, 660907:1-8, 2007, 15th Czech-Polish-Slovak Conference on Wave and Quantum Aspects of Contemporary Optics, Liberec(CZ), 11-15 Sep 2006DOWNLOAD

V. Karasek, P. Zemanek: "What is it optical binding and how to study this phenomena?",
       Proceedings of SPIE 6609, 660909:1-11, 2007, 15th Czech-Polish-Slovak Conference on Wave and Quantum Aspects of Contemporary Optics, Liberec(CZ), 11-15 Sep 2006DOWNLOAD

J. Jezek, T. Cizmar, P. Zemanek: "Manufacturing of extremely narrow polymer fibers by non-diffracting beams",
       Proceedings of SPIE 6609, 66090J:1-7, 2007, 15th Czech-Polish-Slovak Conference on Wave and Quantum Aspects of Contemporary Optics, Liberec(CZ), 11-15 Sep 2006DOWNLOAD

M. Sery, Z. Lostak, M. Kalman, P. Jakl, P. Zemanek: "Compact laser tweezers",
       Proceedings of SPIE 6609, 66090N:1-7, 2007, 15th Czech-Polish-Slovak Conference on Wave and Quantum Aspects of Contemporary Optics, Liberec(CZ), 11-15 Sep 2006DOWNLOAD

2006

P. Zemanek, T. Cizmar, M. Siler: "Optical interference fields: an excellent tool kit to study Brownian dynamics",
       Proceedings of SPIE 6326, 632604:1-15, 2006, Trapping and Optical Micromanipulation III, San Diego(US), 13-17 Aug 2006DOWNLOAD

V. Karasek, T. Cizmar, P. Zemanek: "Optical binding in non-diffracting beams",
       Proceedings of SPIE 6326, 632608:1-9, 2006, Trapping and Optical Micromanipulation III, San Diego(US), 13-17 Aug 2006DOWNLOAD

P. Jakl, T. Cizmar, M. Siler, P. Zemanek: "Static particle sorting in 1D optical lattice",
       Proceedings of SPIE 6326, 632613:1-7, 2006, Trapping and Optical Micromanipulation III, San Diego(US), 13-17 Aug 2006,  DOWNLOAD

T. Cizmar, M. Siler, M. Sery, P. Zemanek: "Precise determination of object position in 1D optical lattice",
       Proceedings of SPIE 6326, 632627:1-11, 2006, Trapping and Optical Micromanipulation III, San Diego(US), 13-17 Aug 2006,  DOWNLOAD

J. Jezek, T. Cizmar, P. Zemanek: "Narrow polymer fibers obtained as a combination of photopolymerization and non-diffracting beams",
       Proceedings of SPIE 6326, 63262H:1-8, 2006, Trapping and Optical Micromanipulation III, San Diego(US), 13-17 Aug 2006,  DOWNLOAD

M. Siler, T. Cizmar, P. Jakl, P. Zemanek: "Sub-micron scale Brownian swimmer or surfer in one dimensional standing wave optical traps",
       Proceedings of SPIE 6326, 63262K:1-9, 2006, Trapping and Optical Micromanipulation III, San Diego(US), 13-17 Aug 2006DOWNLOAD

T. Cizmar, V. Kollarova, M. Siler, P. Jakl, Z. Bouchal, V. Garces-Chavez, K. Dholakia, P. Zemanek: "Non-diffracting beam synthesis used for optical trapping and delivery of sub-micron objects",
       Proceedings of SPIE 6195, 619507:1-7, 2006, Nanophotonics, Strasbourg(FR), 3-5 Apr 2006,  DOWNLOAD

V. Karasek, T. Cizmar, P. Zemanek: "Multistability of optically bound objects",
       Proceedings of SPIE 6195, 619509:1-9, 2006, Nanophotonics, Strasbourg(FR), 3-5 Apr 2006DOWNLOAD

J. Jezek, M. Varecha, J. Amrichova, M. Kozubek, T. Cizmar, P. Zemanek: "Optical tracking of microobjects within living cells",
       Proceedings of SPIE 6180, 618025:1-6, 2006, Photonics, Devices and Systems III, Praha(CZ), 8-11 June 2005DOWNLOAD

T. Cizmar, V. Garces-Chavez, K. Dholakia, P. Zemanek: "Optical conveyor belt for delivery of sub-micron objects",
       Proceedings of SPIE 6180, 618027:1-7, 2006, Photonics, Devices and Systems III, Praha(CZ), 8-11 June 2005DOWNLOAD

P. Jakl, M. Sery, M. Liska, P. Zemanek: "Measurement of surface details with nanometer resolution using several optically held probes",
       Proceedings of SPIE 6180, 61802A:1-6, 2006, Photonics, Devices and Systems III, Praha(CZ), 8-11 June 2005,  DOWNLOAD

P. Zemanek, T. Cizmar, M. Siler, V. Karasek: "Behavior of colloidal microparticles in interference field created by several laser beams",
       Proceedings of SPIE 6180, 61802C:1-7, 2006, Photonics, Devices and Systems III, Praha(CZ), 8-11 June 2005,  DOWNLOAD

2005

J. Jezek, P. Jakl, T. Cizmar, M. Sery, P. Zemanek: "Combination of photopolymerization and optical micromanipulation techniques",
       Proceedings of SPIE 5955, 131-136, 2005,  DOWNLOAD

M. Siler, V. Karasek, T. Cizmar, P. Zemanek: "Behavior of microparticles in laser interference field",
       Proceedings of SPIE 5958, 341-346, 2005,  DOWNLOAD

P. Jakl, M. Sery, M. Liska, P. Zemanek: "How the stiffness of the optical trap depends on the proximity of the dielectric interface",
       Proceedings of SPIE 5958, 2P1-2P8, 2005, DOWNLOAD

V. Karasek, P. Zemanek: "Optical binding in theory",
       Proceedings of SPIE 5958, 0N1-0N8, 2005, DOWNLOAD

M. Sery, M. Siler, T. Cizmar, P. Jakl, P. Zemanek: "Sub-micron particle delivery using evanescent field",
       Proceedings of SPIE 5958, 0L1-0L5, 2005,  DOWNLOAD

V. Karasek, and P. Zemanek: "Optical binding of micron-size spheres",
       Proceedings of SPIE 5930, 291-298, 2005,   DOWNLOAD

T. Cizmar, V. Garces-Chavez, K. Dholakia, and P. Zemanek: "Optical conveyor belt based on Bessel beams",
       Proceedings of SPIE 5930, 0X1-0X7, 2005, DOWNLOAD

P. Zemanek, M. Siler, V. Karasek, and T. Cizmar: "Behavior of submicron colloids in two-dimensional optical lattice",
       Proceedings of SPIE 5930, 1N1-1N7, 2005, DOWNLOAD

M. Siler, M. Sery, T. Cizmar, and P. Zemanek: "Submicron particle localization using evanescent field",
       Proceedings of SPIE 5930, 0R1-0R9, 2005,  DOWNLOAD

2004

P. Jakl, M. Sery, J. Jezek, P. Zemanek: "How the size of a particle approaching dielectric interface influences its behavior",
       Proceedings of SPIE 5514, 636-642, 2004,  DOWNLOAD

T. Cizmar, V. Garces-Chavez, K. Dholakia, P. Zemanek: "Optical trapping in counter-propagating Bessel beams",
       Proceedings of SPIE 5514, 643-651, 2004,  DOWNLOAD

P. Zemanek, V. Karasek, M. Sery: "Behaviour of colloidal microparticles in a planar 3-beam interference field",
       Proceedings of SPIE 5514, 15-26, 2004,    DOWNLOAD

2003

P. Jakl, M. Sery, J. Jezek, P. Zemanek: "Optical tweezers and its use in local probe microscopy",
       Proceedings of VII International Conference Optical methods of flow investigation, Moscow, 28-31, 2003.

J. Jezek, S. Palsa, E. Lukasova, S. Kozubek, P. Jakl, M. Sery, A. Jonas, M. Liska, P. Zemanek: "Employment of laser induced fusion of living cells for the study of spatial structure of chromatin",
       
Proceedings of SPIE 5259, 336-340, 2003,    ABSTRACT

M. Sery, P. Jakl, J. Jezek, A. Jonas, P. Zemanek, M. Liska: "The use of an optically trapped microprobe for scnning details of surface",
       Proceedings of SPIE 5259, 166-169, 2003,    DOWNLOAD

2002

J. Jezek, S. Palsa, E. Lukasova, S. Kozubek, P. Jakl, M. Sery, A. Jonas, M. Liska, P. Zemanek: "Spatial structure of chromatin in hybrid cells produced by laser induced fusion studied by optical microscopy",
       Proceedings of SPIE 5036, 630-634, 2002,   ABSTRACT

M. Sery, P. Jakl, J. Jezek, A. Jonas, M. Liska, P. Zemanek: "Influence of weak reflections from dielectric interfaces on properties of optical trap",
       Proceedings of SPIE 5036, 624-629, 2002.

P. Jakl, J. Jezek, M. Sery, A. Jonas, P. Zemanek: "The use of a microprobe held by a laser beam for the study of the surface reliefs",
       Proceedings of SPIE 4900, 777-783, 2002.

2001

Jan Jezek, P. Zemanek, Alexandr Jonas, Mojmir Sery, Pavel Pokorny, Miroslav Liska: "Study of the behavior of nanoparticle and microparticle in the standing wave trap",
        Proceedings of SPIE 4356, 318-325, 2001,    ABSTRACT

P. Jakl, A. Jonas, E.-L. Florin, P. Zemanek: "Comparison of the single beam and the standing wave trap stiffnesses",
        Proceedings of SPIE 4356, 347-352, 2001,    ABSTRACT

2000

J. Jezek, A. Jonas, M. Liska, P. Jedlicka, E. Lukasova, S. Kozubek, P. Zemánek: "Combined system for optical cutting and multiple-beam optical trapping",
        Proceedings of SPIE 4016, 303-308, 2000.    ABSTRACT

P. Jakl, A. Jonas, J. Lazar, O. Cip, Z. Harna, M. Liska, P. Tomanek, P. Zemanek: "Measurement of submicron laser beam profiles using nanoprobes",
        Proceedings of SPIE 4016, 309-314, 2000.    ABSTRACT

1999

A. Jonas, L. Sramek, M. Liska, P. Zemanek: " Theoretical study of the optical forces and other characteristical parameters in the standing wave.",
        Proceedings of SPIE 3820, 70-76, 1999.    ABSTRACT

P. Zemanek, L. Sramek, A. Jonas, Z.Moravcik, R. Janisch, M. Liska: "Standing wave trap and single beam gradient optical trap - experiments and biological applications.",
        Proceedings of SPIE 3820, 401-410, 1999.    ABSTRACT

1998

A. Jonas, L. Sramek, M. Liska, P. Zemanek : "Efficient particle trapping using an upward reflected laser beam.",
        Proceedings of SPIE 3580, 91-101, 1998.    DOWNLOAD

L. Sramek, A. Jonas, M. Liska, P. Zemanek : "Laser trapping of micron sized objects: theory and experiment.",
        Proceedings of SPIE 3580, 82-90, 1998.     DOWNLOAD

A. Jonas, L. Sramek, M. Liska, P. Zemanek : "Manipulation of microobjects by means of the focused laser beam.",
        
Proceedings of SPIE 3320, 104-110, 1998.     DOWNLOAD

P. Zemanek, C. J. Foot : "Atomic dipole trap formed by a standing Gaussian wave",
        Proceedings of SPIE  3580, 102-111, 1998.    DOWNLOAD

P. Zemanek, C. J. Foot : "Strong Gaussian standing wave - an efficient tool for laser cooling of atomic beams.",
       
Proceedings of SPIE 3320, 97-103, 1998.     DOWNLOAD

P. Zemanek : "Dipole force slowing the atoms.",
        Optical Tweezers - Mini-Symposium. Grasmere (GB), 94.08.22-94.08.25



Ph.D Thesis              Top

Z. Pilat: "Optical micromanipulation techniques combined with microspectroscopic methods" Ph.D. Thesis, Brno University of Technology, Faculty of mechanical engineering. Brno. 2014. DOWNLOAD

M. Siler : "Behavior of microparticles in different types of optical traps"  Ph.D. Thesis, Masaryk University, Faculty of Science. Brno. 2009.  DOWNLOAD, supplementary material

V. Karasek : "Numerical computation of optical force interactions "  Ph.D. Thesis, Masaryk University, Faculty of Science. Brno. 2009.  DOWNLOAD

T. Cizmar : "Optical traps generated by non-traditional beams" Ph.D. Thesis, Masaryk University, Faculty of Science. Brno. 2006. DOWNLOAD



Posters              Top

M. Siler, T. Cizmar, M. Sery, P. Jakl and P. Zemanek: "Particle delivery in optical conveyor belt: optimal delivery speed and the influence of viscosity near surface",
       Trends in Optical Micromanipulation, Obergurgl, Austria 2007.   DOWNLOAD

V. Karasek and P. Zemanek: "Particle self-organizing in non-diffracting laser beams",
       OSA "Frontiers in Optics" Annual Meeting, Rochester, NY, USA 2006.   DOWNLOAD

T. Cizmar, M. Siler, M. Sery and P. Zemanek: "Precise determination of object position in 1D optical lattice",
       SPIE "Optics and Photonics" Annual Meeting, San Diego, CA, USA 2006.   DOWNLOAD

J. Jezek, T. Cizmar and P. Zemanek: "Narrow polymer fibers obtained as a combination of photopolymerization and non-diffracting beams",
       SPIE "Optics and Photonics" Annual Meeting, San Diego, CA, USA 2006.   DOWNLOAD

M. Siler, T. Cizmar, P. Jakl and P. Zemanek: "Sub-micron scale Brownian swimmer or surfer in one dimensional standing wave optical traps",
       SPIE "Optics and Photonics" Annual Meeting, San Diego, CA, USA 2006.   DOWNLOAD

P. Jakl, M. Sery, M. Liska and P. Zemanek: "How stiffness of optical trap depends on proximity of dielectric interface",
       SPIE "Optics and Optoelectronics", Warsaw, Poland 2005.   DOWNLOAD

J. Jezek, P. Jakl, T. Cizmar, M. Sery and P. Zemanek: "Combination of photopolymerization and optical micromanipulation techniques",
       SPIE "Optics and Optoelectronics", Warsaw, Poland 2005.   DOWNLOAD

J. Jezek, M. Varecha, J. Amrichova, M. Kozubek, T. Cizmar and P. Zemanek: "Optical trapping of microobjects within living cells",
       "Photonics, Devices and Systems", Prague, Czech Republic 2005.   DOWNLOAD

T. Cizmar, V. Garces-Chavez, K. Dholakia and P. Zemanek: "Optical trapping in counter-propagating Bessel beams",
       SPIE "Optics and Photonics" Annual Meeting, Denver, CO, USA 2004.   DOWNLOAD

P. Jakl, M. Sery, J. Jezek and P. Zemanek: "How the size of a particle approaching dielectric interface influences its behavior",
       SPIE "Optics and Photonics" Annual Meeting, Denver, CO, USA 2004.   DOWNLOAD

M. Sery, P. Jakl, J. Jezek, A. Jonas, M. Liska and P. Zemanek: "The use of an optically trapped microprobe for scanning of surface details",
       "Czech-Slovak-Polish Optical Conference", Kryzova, Poland 2002.   DOWNLOAD

J. Jezek, S. Palsa, E. Lukasova, S. Kozubek, P. Jakl, M. Sery, A. Jonas, M. Liska and P. Zemanek: "Employment of laser induced fusion of living cells for the study of spatial structure of chromatin",
       "Czech-Slovak-Polish Optical Conference", Kryzova, Poland 2002.   DOWNLOAD


Movies               Top

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Our papers in BibTex file              Top

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