Uhlirova H, Cizmar T, Pakan JMP, Gomes A. Exploiting Complex Media Photonics to Illuminate Brain's Hidden Depth. NEUROPHOTONICS, 11, S11501 (2024).

Michálková I, Colombel S, Gomes AD, Cizmar T. Generating Airy beams through multimode fibres. Optics Express, 32, 6838?6847 (2024).

Uhlirova H, Stib?rek M, Pikálek T, Gomes A, Turtaev S, Kolbabkova P, Cizmar T. ``There's plenty of room at the bottom'': deep brain imaging with holographic endo-microscopy. NEUROPHOTONICS, 11, (2024).

Stib?rek M, Ondrá?ková P, Tuckova T, Turtaev S, ?iler M, Pikálek T, Jákl P, Gomes A, Krejci J, Kolbabkova P, Uhlirova H, Cizmar T. 110 mu m thin endo-microscope for deep-brain in vivo observations of neuronal connectivity, activity and blood flow dynamics. NATURE COMMUNICATIONS, 14, 1897 (2023).

Brodský J, Gablech I, Migliaccio L, Havli'cek M, Donahue MJJ, Glowacki EDD. Downsizing the Channel Length of Vertical Organic Electrochemical Transistors. ACS APPLIED MATERIALS & INTERFACES, 15, 27002-27009 (2023).

Jákl P, ?iler M, Je?ek J, Cifuentes A, Trägårdh J, Zemánek P, Cizmar T. Endoscopic Imaging Using a Multimode Optical Fibre Calibrated with Multiple Internal References. Photonics, 9, 37 (2022).

B?tait? UG, Kupianskyi H, Cizmar T, Phillips DB. How to Build the ``Optical Inverse'' of a Multimode Fibre. Intelligent Computing, 2022, 9816026 (2022).

Du Y, Turtaev S, Leite IT, Lorenz A, Kobelke J, Wondraczek K, ?i?már T. Hybrid multimode - multicore fibre based holographic endoscope for deep-tissue neurophotonics. Light: Advanced Manufacturing, 3, 1 (2022).

Cifuentes A, Trägårdh J. A method for single particle tracking through a multimode fiber. Opt. Express, 30, 36055?36064 (2022).

Gomes AD, Turtaev S, Du Y, ?i?már T. Near perfect focusing through multimode fibres. Opt. Express, 30, 10645?10663 (2022).

Abdelfattah A, Ahuja S, Akkin T, Allu SRao, Boas DA, Brake J, Buckley EM, Campbell RE, Chen AI, Cheng X, ?i?már T, Costantini I, De Vittorio M, Devor A, Doran PR, Khatib MEl, Emiliani V, Fomin-Thunemann N, Fainman Y, Alfonso TFernández, Ferri CGL, Gilad A, Han X, Harris A, Hillman EMC, Hochgeschwender U, Holt MG, Ji N, Kiliç K, Lake EMR, Li L, Li T, Mächler P, Mesquita RC, Miller EW, Nadella KMNaga Srini, U. Nägerl V, Nasu Y, Nimmerjahn A, Ondrá?ková P, Pavone FS, Campos CPerez, Peterka DS, Pisano F, Pisanello F, Puppo F, Sabatini BL, Sadegh S, Sakad?ic S, Shoham S, Shroff SN, R. Silver A, Sims RR, Smith SL, Srinivasan VJ, Thunemann M, Tian L, Tian L, Troxler T, Valera A, Vaziri A, Vinogradov SA, Vitale F, Wang LV, Uhlí?ová H, Xu C, Yang C, Yang M-H, Yellen G, Yizhar O, Zhao Y. Neurophotonic tools for microscopic measurements and manipulation: status report. Neurophotonics, 9, (2022).

Rebro?ová K, Bernatová S, ?iler M, Uhlirova M, Samek O, Je?ek J, Holá V, R??i?ka F, Zemánek P. Raman spectroscopy?a tool for rapid differentiation among microbes causing urinary tract infections. Analytica Chimica Acta, 1191, 339292 (2022).

Gigan S, Katz O, de Aguiar HB, Andresen ERavn, Aubry A, Bertolotti J, Bossy E, Bouchet D, Brake J, Brasselet S, Bromberg Y, Cao H, Chaigne T, Cheng Z, Choi W, ?i?már T, Cui M, Curtis VR, Defienne H, Hofer M, Horisaki R, Horstmeyer R, Ji N, LaViolette AK, Mertz J, Moser C, Mosk AP, Pégard NC, Piestun R, Popoff S, Phillips DB, Psaltis D, Rahmani B, Rigneault H, Rotter S, Tian L, Vellekoop IM, Waller L, Wang L, Weber T, Xiao S, Xu C, Yamilov A, Yang C, Y?lmaz H. Roadmap on wavefront shaping and deep imaging in complex media. Journal of Physics: Photonics, 4, 042501 (2022).

Pikálek T, Stib?rek M, Simpson S, Cizmar T, Trägårdh J. Suppression of the Non-Linear Background in a Multimode Fibre CARS Endoscope. Biomedical Optics Express, 13, 862?864 (2022).

Askari M, Kirkpatrick BC, ?i?már T, Di Falco A. All-optical manipulation of photonic membranes. Opt. Express, 29, 14260?14268 (2021).

Li S, Saunders C, Lum DJ, Murray-Bruce J, Goyal VK, Cizmar T, Phillips DB. Compressively sampling the optical transmission matrix of a multimode fibre. LIGHT-SCIENCE & APPLICATIONS, 10, 88 (2021).

Tu?ková T, ?iler M, Flaes DEBoonzajer, Jákl P, Turtaev S, Krátký S, Heintzmann R, Uhlí?ová H, ?i?már T. Computational image enhancement of multimode fibre-based holographic endo-microscopy: harnessing the muddy modes. Opt. Express, 29, 38206?38220 (2021).

Li S, Horsley SAR, Tyc T, Cizmar T, Phillips DB. Memory effect assisted imaging through multimode optical fibres. Nature Communications, 12, 3751 (2021).

Leite IT, Turtaev S, Flaes DEBoonzaj, ?i?már T. Observing distant objects with a multimode fiber-based holographic endoscope. APL Photonics, 6, 036112 (2021).

Cifuentes A, Pikálek T, Ondrá?ková P, Amezcua-Correa R, Antonio-Lopez JEnrique, Cizmar T, Trägårdh J. Polarization-resolved second-harmonic generation imaging through a multimode fiber. Optica, 8, 1065?1074 (2021).

Bernatová S, Rebro?ová K, Pilát Z, ?erý M, Gjevik A, Samek O, Je?ek J, ?iler M, Kizovský M, Klementová T, Holá V, R??i?ka F, Zemánek P. Rapid detection of antibiotic sensitivity of Staphylococcus aureus by Raman tweezers. Eur. Phys. J. Plus, 136, 233 (2021).

Silveira BM, Pikálek T, Stib?rek M, Ondrá?ková P, Jákl P, Leite IT, ?i?már T. Side-view holographic endomicroscopy via a custom-terminated multimode fibre. Opt. Express, 29, 23083?23095 (2021).

Rudolf B, Du Y, Turtaev S, Leite IT, ?i?már T. Thermal stability of wavefront shaping using a DMD as a spatial light modulator. Opt. Express, 29, 41808?41818 (2021).

Flaes DBoonzajer, ?tolzová H, ?i?már T. Time-averaged image projection through a multimode fiber. Opt. Express, 29, 28005?28020 (2021).

Stellinga D, Phillips DB, Mekhail SPeter, Selyem A, Turtaev S, ?i?már T, Padgett MJ. Time-of-flight 3D imaging through multimode optical fibers. Science, 374, 1395-1399 (2021).

Pilát Z, Joná? A, Pilátová J, Klementová T, Bernatová S, ?iler M, Ma?ka T, Kizovský M, R??i?ka F, Pan??ek R, Neugebauer U, Samek O, Zemánek P. Analysis of bacteriophage-host interaction by Raman tweezers. Analytical Chemistry, 92, 12304?12311 (2020).

Reversat A, Gaertner F, Merrin J, Stopp J, Tasciyan S, Aguilera J, de Vries I, Hauschild R, Hons M, Piel M, Callan-Jones A, Voituriez R, Sixt M. Cellular locomotion using environmental topography. Nature, 582, 582?585 (2020).

Box SJ, Allen MP, Phillips DB, Simpson SH. Entropy Production in an Elementary, Light Driven Micro-Machine. Frontiers in Physics, 8, 538 (2020).

Rebro?ová K, ?iler M, Samek O, R??i?ka F, Bernatová S, Je?ek J, Zemánek P, Holá V. Identification of ability to form biofilm in Candida parapsilosis and Staphylococcus epidermidis by Raman spectroscopy. Future Microbiology, 14, 509-517 (2019).

Trägårdh J, Pikálek T, ?erý M, Meyer T, Popp J, ?i?már T. Label-free CARS microscopy through a multimode fiber endoscope. Opt. Express, 27, 30055?30066 (2019).

Plidschun M, Weidlich S, ?iler M, Weber K, ?i?már T, Schmidt MA. Nanobore fiber focus trap with enhanced tuning capabilities. Opt. Express, 27, 36221?36230 (2019).

Pikálek T, Trägårdh J, Simpson S, ?i?már T. Wavelength dependent characterization of a multimode fibre endoscope. Opt. Express, 27, 28239?28253 (2019).

Turtaev S, Leite IT, Altwegg-Boussac T, Pakan JMP, Rochefort NL, ?i?már T. High-fidelity multimode fibre-based endoscopy for deep brain in vivo imaging. Light: Sci. Appl., 7, 92 (2018).

Flaes DEB, Stopka J, Turtaev S, de Boer JF, Tyc T, ?i?már T. Robustness of Light-Transport Processes to Bending Deformations in Graded-Index Multimode Waveguides. Phys. Rev. Lett., 120, 233901:1-5 (2018).

Vasquez-Lopez SA, Turcotte R, Koren V, Ploschner M, Padamsey Z, Booth M, ?i?már T, Emptage NJ. Subcellular spatial resolution achieved for deep-brain imaging in vivo using a minimally invasive multimode fiber. Light: Sci. Appl., 7, 110 (2018).

Leite IT, Turtaev S, Jiang X, ?iler M, Cuschieri A, Russell PSt. J, ?i?már T. Three-dimensional holographic optical manipulation through a high-numerical-aperture soft-glass multimode fibre. Nature Photon., 12, 33?39 (2018).