TY - JOUR T1 - Analysis of bacteriophage-host interaction by Raman tweezers JF - Analytical Chemistry Y1 - 2020 A1 - Pilát, Z A1 - Jonáš, A A1 - Pilátová, J A1 - Klementová, T A1 - Bernatová, S A1 - Šiler, M A1 - Maňka, T A1 - Kizovský, M A1 - Růžička, F A1 - Panůček, R A1 - Neugebauer, U A1 - Samek, O A1 - Zemánek, P KW - BF KW - KF KW - MF VL - 92 ER - TY - JOUR T1 - Tunable Soft-Matter Optofluidic Waveguides Assembled by Light JF - ACS Phot. Y1 - 2019 A1 - Oto Brzobohatý A1 - Lukáš Chvátal A1 - A. Jonáš A1 - M Šiler A1 - J. Kaňka A1 - J Ježek A1 - P. Zemánek KW - LF KW - MF VL - 6 ER - TY - JOUR T1 - Detection of chloroalkanes by surface-enhanced raman spectroscopy in microfluidic chips JF - Sensors Y1 - 2018 A1 - Z. Pilát A1 - Kizovský, M. A1 - J Ježek A1 - Krátký, S. A1 - Sobota, J. A1 - M Šiler A1 - O. Samek A1 - Buryška, T. A1 - Vaňáček, P. A1 - Damborský, J. A1 - Prokop, Z. A1 - P. Zemánek KW - BF KW - MF VL - 18 ER - TY - JOUR T1 - Diffusing up the Hill: Dynamics and Equipartition in Highly Unstable Systems JF - Phys. Rev. Lett. Y1 - 2018 A1 - M Šiler A1 - Ornigotti, L. A1 - Oto Brzobohatý A1 - P Jákl A1 - Artem Ryabov A1 - Holubec, V. A1 - P. Zemánek A1 - Radim Filip KW - LF KW - MF VL - 121 ER - TY - JOUR T1 - Three-dimensional holographic optical manipulation through a high-numerical-aperture soft-glass multimode fibre JF - Nature Photon. Y1 - 2018 A1 - I.T. Leite A1 - S. Turtaev A1 - Xin Jiang A1 - M Šiler A1 - Alfred Cuschieri A1 - Philip St. J. Russell A1 - Tomáš Čižmár KW - KF KW - MF VL - 12 ER - TY - JOUR T1 - Transverse spin forces and non-equilibrium particle dynamics in a circularly polarized vacuum optical trap JF - Nature Commun. Y1 - 2018 A1 - Vojtech Svak A1 - Oto Brzobohatý A1 - M Šiler A1 - P Jákl A1 - J. Kaňka A1 - P. Zemánek A1 - S. H. Simpson KW - LF KW - MF VL - 9 ER - TY - JOUR T1 - Differentiation between Staphylococcus aureus and Staphylococcus epidermidis strains using Raman spectroscopy JF - Future Microbiology Y1 - 2017 A1 - K. Rebrošová A1 - M Šiler A1 - O. Samek A1 - F. Růžička A1 - Silva Bernatová A1 - J Ježek A1 - P. Zemánek A1 - V. Holá KW - BF KW - MF VL - 12 ER - TY - JOUR T1 - Dynamics of an optically bound structure made of particles of unequal sizes JF - Opt. Lett. Y1 - 2017 A1 - Vítězslav Karásek A1 - M Šiler A1 - Oto Brzobohatý A1 - P. Zemánek KW - LF KW - MF VL - 42 ER - TY - JOUR T1 - Morphological and Production Changes in Planktonic and Biofilm Cells Monitored Using SEM and Raman Spectroscopy JF - Microscopy and Microanalysis Y1 - 2017 A1 - K. Hrubanová A1 - V. Krzyžánek A1 - O. Samek A1 - R. Skoupý A1 - M Šiler A1 - J Ježek A1 - S. Obruča A1 - P. Zemánek KW - BF KW - MF VL - 23 ER - TY - JOUR T1 - Rapid identification of staphylococci by Raman spectroscopy JF - Sci. Rep. Y1 - 2017 A1 - K. Rebrošová A1 - M Šiler A1 - O. Samek A1 - F. Růžička A1 - S. Bernatová A1 - V. Holá A1 - J Ježek A1 - P. Zemánek A1 - J. Sokolová A1 - P. Petráš KW - BF KW - MF VL - 7 ER - TY - JOUR T1 - Thermally induced micro-motion by inflection in optical potential JF - Sci. Rep. Y1 - 2017 A1 - M Šiler A1 - P Jákl A1 - Oto Brzobohatý A1 - Artem Ryabov A1 - Radim Filip A1 - P. Zemánek KW - LF KW - MF VL - 7 ER - TY - JOUR T1 - Direct measurement of the temperature profile close to an optically trapped absorbing particle JF - Opt. Lett. Y1 - 2016 A1 - M Šiler A1 - J Ježek A1 - P Jákl A1 - Z. Pilát A1 - P. Zemánek KW - MF VL - 41 ER - TY - JOUR T1 - Noise-to-signal transition of a Brownian particle in the cubic potential: II. optical trapping geometry JF - Journal of Optics Y1 - 2016 A1 - P. Zemánek A1 - M Šiler A1 - Oto Brzobohatý A1 - P Jákl A1 - Radim Filip KW - MF VL - 18 ER - TY - JOUR T1 - Quantitative Raman Spectroscopy Analysis of Polyhydroxyalkanoates Produced by Cupriavidus necator H16 JF - Sensors Y1 - 2016 A1 - O. Samek A1 - S. Obruča A1 - M Šiler A1 - P. Sedláček A1 - Pavla Benešová A1 - D. Kučera A1 - I. Márová A1 - J Ježek A1 - Silva Bernatová A1 - P. Zemánek KW - MF VL - 16 ER - TY - JOUR T1 - Aberration resistant axial localization using a self-imaging of vortices JF - Opt. Express Y1 - 2015 A1 - Michal Baránek A1 - Petr Bouchal A1 - M Šiler A1 - Zdeněk Bouchal KW - MF VL - 23 ER - TY - JOUR T1 - Complex rotational dynamics of multiple spheroidal particles in a circularly polarized, dual beam trap JF - Opt. Express Y1 - 2015 A1 - Oto Brzobohatý A1 - Alejandro V. Arzola A1 - M Šiler A1 - Lukáš Chvátal A1 - P Jákl A1 - S. H. Simpson A1 - P. Zemánek KW - MF VL - 23 ER - TY - JOUR T1 - Cryo-SEM and Raman Spectroscopy Study of the Involvement of Polyhydroxyalkanoates in Stress Response of Bacteria JF - Microscopy and Microanalysis Y1 - 2015 A1 - V. Krzyžánek A1 - K. Hrubanová A1 - O. Samek A1 - S. Obruča A1 - I. Márová A1 - Silva Bernatová A1 - M Šiler A1 - P. Zemánek KW - MF VL - 21 ER - TY - JOUR T1 - Identification of individual biofilm-forming bacterial cells using Raman tweezers JF - J. Biomed. Opt. Y1 - 2015 A1 - O. Samek A1 - Silva Bernatová A1 - J Ježek A1 - M Šiler A1 - M. Šerý A1 - V. Krzyžánek A1 - K. Hrubanová A1 - P. Zemánek A1 - V. Holá A1 - F. Růžička KW - MF VL - 20 ER - TY - JOUR T1 - Influence of Culture Media on Microbial Fingerprints Using Raman Spectroscopy JF - Sensors Y1 - 2015 A1 - K. Mlynariková A1 - O. Samek A1 - Silva Bernatová A1 - F. Růžička A1 - J Ježek A1 - A. Haroniková A1 - M Šiler A1 - P. Zemánek A1 - V. Holá KW - MF VL - 15 ER - TY - JOUR T1 - Non-spherical gold nanoparticles trapped in optical tweezers: shape matters JF - Opt. Express Y1 - 2015 A1 - Oto Brzobohatý A1 - M Šiler A1 - J. Trojek A1 - Lukáš Chvátal A1 - Vítězslav Karásek A1 - P. Zemánek KW - MF VL - 23 ER - TY - JOUR T1 - Optical trapping in secondary maxima of focused laser beam JF - J. Quant. Spectrosc. Radiat. Transf. Y1 - 2015 A1 - M Šiler A1 - P. Zemánek KW - MF VL - 162 ER - TY - JOUR T1 - Three-Dimensional Optical Trapping of a Plasmonic Nanoparticle using Low Numerical Aperture Optical Tweezers JF - Sci. Rep. Y1 - 2015 A1 - Oto Brzobohatý A1 - M Šiler A1 - J. Trojek A1 - Lukáš Chvátal A1 - Vítězslav Karásek A1 - Aleš Paták A1 - Zuzana Pokorná A1 - Filip Mika A1 - P. Zemánek KW - MF VL - 5 ER - TY - JOUR T1 - Candida parapsilosis Biofilm Identification by Raman Spectroscopy JF - Int. J. Mol. Sci. Y1 - 2014 A1 - O. Samek A1 - K. Mlynariková A1 - Silva Bernatová A1 - J Ježek A1 - V. Krzyžánek A1 - M Šiler A1 - P. Zemánek A1 - F. Růžička A1 - V. Holá A1 - M. Mahelová KW - MF VL - 15 ER - TY - JOUR T1 - Optical sorting of nonspherical and living microobjects in moving interference structures JF - Opt. Express Y1 - 2014 A1 - P Jákl A1 - Alejandro V. Arzola A1 - M Šiler A1 - Lukáš Chvátal A1 - Karen Volke-Sepúlveda A1 - P. Zemánek KW - MF VL - 22 ER - TY - JOUR T1 - Experimental demonstration of optical transport, sorting and self-arrangement using a `tractor beam' JF - Nature Photon. Y1 - 2013 A1 - Oto Brzobohatý A1 - Vítězslav Karásek A1 - M Šiler A1 - Lukáš Chvátal A1 - Tomáš Čižmár A1 - P. Zemánek KW - MF VL - 7 ER - TY - JOUR T1 - Following the mechanisms of bacteriostatic versus bacericidal action using Raman spectroscopy JF - Molecules Y1 - 2013 A1 - Silva Bernatová A1 - O. Samek A1 - Z. Pilát A1 - M. Šerý A1 - J Ježek A1 - P Jákl A1 - M Šiler A1 - V. Krzyžánek A1 - P. Zemánek A1 - V. Holá A1 - M. Dvořáčková A1 - F. Růžička KW - MF VL - 18 ER - TY - JOUR T1 - Metallic nanoparticles in a standing wave: optical force and heating JF - J. Quant. Spectrosc. Radiat. Transf. Y1 - 2013 A1 - M Šiler A1 - Lukáš Chvátal A1 - P. Zemánek KW - MF VL - 126 ER - TY - JOUR T1 - Optical forces in a non-diffracting vortex beam JF - J. Quant. Spectrosc. Radiat. Transf. Y1 - 2013 A1 - M Šiler A1 - P. Zemánek KW - MF VL - 126 ER - TY - JOUR T1 - Optical manipulation of aerosol droplets using a holographic dual and single beam trap JF - Opt. Lett. Y1 - 2013 A1 - Oto Brzobohatý A1 - M Šiler A1 - J Ježek A1 - P Jákl A1 - P. Zemánek KW - MF VL - 38 ER - TY - JOUR T1 - Optical forces induced behavior of a particle in a non-diffracting vortex beam JF - Opt. Express Y1 - 2012 A1 - M Šiler A1 - P Jákl A1 - Oto Brzobohatý A1 - P. Zemánek KW - MF VL - 20 ER - TY - JOUR T1 - Speed enhancement of multi-particle chain in a traveling standing wave JF - Appl. Phys. Lett. Y1 - 2012 A1 - M Šiler A1 - Tomáš Čižmár A1 - P. Zemánek KW - MF VL - 100 ER - TY - JOUR T1 - Parametric study of optical forces acting upon nanoparticles in a single, or a standing, evanescent wave JF - J. Opt. Y1 - 2011 A1 - M Šiler A1 - P. Zemánek KW - MF VL - 13 ER - TY - JOUR T1 - Static and dynamic behavior of two optically bound microparticles in a standing wave JF - Opt. Express Y1 - 2011 A1 - Oto Brzobohatý A1 - Vítězslav Karásek A1 - M Šiler A1 - J. Trojek A1 - P. Zemánek KW - MF VL - 19 ER - TY - JOUR T1 - Experimental and theoretical determination of optical binding forces JF - Opt. Express Y1 - 2010 A1 - Oto Brzobohatý A1 - Tomáš Čižmár A1 - Vítězslav Karásek A1 - M Šiler A1 - Kishan Dholakia A1 - P. Zemánek KW - MF VL - 18 ER - TY - JOUR T1 - Particle jumps between optical traps in a one-dimensional optical lattice JF - New. J. Phys. Y1 - 2010 A1 - M Šiler A1 - P. Zemánek KW - MF VL - 12 ER - TY - JOUR T1 - Surface delivery of a single nanoparticle under moving evanescent standing-wave illumination JF - New. J. Phys. Y1 - 2008 A1 - M Šiler A1 - Tomáš Čižmár A1 - A. Jonáš A1 - P. Zemánek KW - MF VL - 10 ER - TY - JOUR T1 - Optical forces acting on a nanoparticle placed into an interference evanescent field JF - Opt. Commun. Y1 - 2007 A1 - M Šiler A1 - P. Zemánek KW - MF VL - 275 ER - TY - JOUR T1 - Optical forces generated by evanescent standing waves and their usage for sub-micron particle delivery JF - Appl. Phys. B Y1 - 2006 A1 - M Šiler A1 - Tomáš Čižmár A1 - M. Šerý A1 - P. Zemánek KW - MF VL - 84 ER - TY - JOUR T1 - An optical nanotrap array movable over a milimetre range JF - Appl. Phys. B Y1 - 2006 A1 - Tomáš Čižmár A1 - M Šiler A1 - P. Zemánek KW - MF VL - 84 ER - TY - JOUR T1 - Optical sorting and detection of sub-micron objects in a motional standing wave JF - Phys. Rev. B Y1 - 2006 A1 - Tomáš Čižmár A1 - M Šiler A1 - M. Šerý A1 - P. Zemánek A1 - V. Garcés-Chávez A1 - Kishan Dholakia KW - MF VL - 74 ER -