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Brzobohat\'fd O, Chv\'e1tal L, Jon\'e1? A, Zem\'e1nek P. Dynamic formation of arrays of interacting optical spatial solitons under light-sheet illumination. Optics Letters, 50, 4318?4321 (2025).\par \par ?iler M, Svak V, Jon\'e1? A, Simpson SH, Brzobohat\'fd O, Zem\'e1nek P. Bayesian Estimation of Experimental Parameters in Stochastic Inertial Systems: Theory, Simulations, and Experiments with Objects Levitated in Vacuum. Phys. Rev. Appl., 19, 064059 (2023).\par \par Brzobohat\'fd O, Chv\'e1tal L, Jon\'e1? A, ?iler M, Ka?ka J, Je?ek J, Zem\'e1nek P. Tunable Soft-Matter Optofluidic Waveguides Assembled by Light. ACS Phot., 6, 403-410 (2019).\par \par Ozbakir Y, Jon\'e1? A, Kiraz A, Erkey C. A new type of microphotoreactor with integrated optofluidic waveguide based on solid-air nanoporous aerogels. Royal Society Open Science, 5, 180802 (2018).\par \par Rashid Z, Jon\'e1? A, Buczynski R, Kiraz A. Optofluidic Dye Lasers Based on Holey Fibers: Modeling and PerformanceAnalysis. J. Lightwave. Technol., 36, 4114-4122 (2018).\par \par Rashid Z, Atay I, Soydan S, M. Yagci B, Jon\'e1? A, Yilgor E, Kiraz A, Yilgor I. Reversible switching of wetting properties and erasable patterning of polymer surfaces using plasma oxidation and thermal treatment. Appl. Surf. Sci., 441, 841-852 (2018).\par \par Baloch SKhan, Jon\'e1? A, Kiraz A, B. Alaca E, Erkey C. Sensitivity of compositional measurement of high-pressure fluid mixtures using microcantilever frequency response. Sensors Actuators A, 278, 111-126 (2018).\par \par Pil\'e1t Z, Jon\'e1? A, Je?ek J, Zem\'e1nek P. Effects of Infrared Optical Trapping on Saccharomyces cerevisiae in a Microfluidic System. Sensors, 17, 2640 (2017).\par \par Jon\'e1? A, Pil\'e1t Z, Je?ek J, Bernatov\'e1 S, Fo?t T, Zem\'e1nek P, Aas M, Kiraz A. Thermal tuning of spectral emission from optically trapped liquid-crystal droplet resonators. J. Opt. Soc. Am. B, 34, 1855-1864 (2017).\par \par Aas M, Jon\'e1? A, Kiraz A, Brzobohat\'fd O, Je?ek J, Pil\'e1t Z, Zem\'e1nek P. Spectral tuning of lasing emission from optofluidic droplet microlasers using optical stretching. Opt. Express, 21, 21380-21394 (2013).\par \par Samek O, Zem\'e1nek P, Jon\'e1? A, Telle HH. Characterization of oil-producing microalgae using Raman spectroscopy. Laser Phys. Lett., 8, 701?709 (2011).\par \par Jon\'e1? A, De Luca AC, Pesce G, Rusciano G, Sasso A, Caserta S, Guido S, Marrucci G. Diffusive Mixing of Polymers Investigated by Raman Microspectroscopy andMicrorheology. Langmuir, 26, 14223-14230 (2010).\par \par Samek O, Jon\'e1? A, Pil\'e1t Z, Zem\'e1nek P, Nedbal L, T?\'edska J, Kotas P, Trt\'edlek M. Raman Microspectroscopy of Individual Algal Cells: Sensing Unsaturation of Storage Lipids in vivo. Sensors, 10, 8635?8651 (2010).\par \par Bartsch TF, Fisinger S, Kochanczyk MD, Huang R, Jon\'e1? A, Florin E-L. Detecting Sequential Bond Formation Using Three-Dimensional Thermal Fluctuation Analysis. Chem. Phys. Chem., 10, 1541-1547 (2009).\par \par Wu P, Huang R, Tischer C, Jon\'e1? A, Florin E-L. Direct Measurement of the Nonconservative Force Field Generated byOptical Tweezers. Phys. Rev. Lett., 103, 108101 (2009).\par \par Jon\'e1? A, Zem\'e1nek P. Light at work: The use of optical forces for particlemanipulation, sorting, and analysis. Electophoresis, 29, 4813?4851 (2008).\par \par ?iler M, ?i?m\'e1r T, Jon\'e1? A, Zem\'e1nek P. Surface delivery of a single nanoparticle under movingevanescent standing-wave illumination. New. J. Phys., 10, 113010 (2008).\par \par J\'e1kl P, ?er\'fd M, Je?ek J, Jon\'e1? A, Li?ka M, Zem\'e1nek P. Behaviour of an optically trapped probe approaching a dielectric interface. J Mod. Optics, 50, 1615-1625 (2003).\par \par Zem\'e1nek P, Jon\'e1? A, J\'e1kl P, ?er\'fd M, Je?ek J, Li?ka M. Theoretical comparison of optical traps created by standing wave and single beam. Opt. Commun., 220, 401-412 (2003).\par \par Zem\'e1nek P, Jon\'e1? A, Li?ka M. Simplified description of optical forces acting on a nanoparticle in the Gaussian standing wave. J. Opt. Soc. Am. A, 19, 1025-1034 (2002).\par \par Jon\'e1? A, Zem\'e1nek P, Florin E-L. Single beam trapping in front of reflective surfaces. Opt. Lett., 26, 1466?1468 (2001).\par \par Zem\'e1nek P, Jon\'e1? A, ?r\'e1mek L, Li?ka M. Optical trapping of nanoparticles and microparticles using Gaussian standing wave. Opt. Lett., 24, 1448?1450 (1999).\par \par Zem\'e1nek P, Jon\'e1? A, ?r\'e1mek L, Li?ka M. Optical trapping of Rayleigh particles using a Gaussian standing wave. Opt. Commun., 151, 273?285 (1998).\par \par }